| Gene ID | Zm.17357.1.S1_at |
| Gene name | |
| Homology with Arabidopsis | Similar to At1g29195: unknown protein (HF=5e+0) |
| Module size | 6 genes |
| NF | 0.15 |
| %ile | 9.9 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.73 | 89.9 | 0.94 | Zm.17357.1.S1_at | CK370769 | - | - | 5e+0 | At1g29195 | unknown protein | O.I. | H.G. | S.X. | |
| 0.50 | 65.7 | 0.94 | Zm.376.1.A1_at | BM074849 | Hypoxically induced transcript 2 | - | 2e-3 | At1g05000 | tyrosine specific protein phosphatase family protein | O.I. | H.G. | S.X. | |
| 0.50 | 65.7 | 0.95 | ZmAffx.566.1.S1_at | AI714636 | - | - | 2e-1 | At5g05610 | AL1 (ALFIN-LIKE 1) | O.I. | H.G. | S.X. | |
| 0.36 | 41.3 | 0.94 | Zm.5732.1.A1_at | AY108368.1 | hypothetical protein LOC100272253 | - | 1e+0 | At1g05780 | unknown protein | O.I. | H.G. | S.X. | |
| 0.18 | 11.6 | 0.94 | Zm.4705.1.A1_at | BG840802 | - | - | 2e-6 | At1g14980 | CPN10 (CHAPERONIN 10) | O.I. | H.G. | S.X. | |
| 0.03 | 1.1 | 0.93 | ZmAffx.238.1.A1_at | AI670250 | - | - | 1e+1 | At3g62140 | unknown protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 13.1 | 98.7 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 12.1 | 98.6 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 11.6 | 98.6 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 11.1 | 98.5 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 11.0 | 98.5 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 10.8 | 98.5 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 10.6 | 98.4 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 10.3 | 98.4 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 9.8 | 98.3 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.3 | 96.9 | GSM320456 | protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.63 | 82.7 | Os01g0758500 | At1g29195 | - | Conserved hypothetical protein | 5e-5 | At1g29195 | unknown protein | O.I. | H.G. | S.X. | |
| 0.31 | 34.5 | Os01g0118600 | At1g29195 | - | Protein of unknown function DUF563 family protein | 6e-5 | At3g18170 | transferase, transferring glycosyl groups | O.I. | H.G. | S.X. | |
| 0.26 | 25.6 | Os02g0117900 | At1g29195 | - | Protein of unknown function DUF231 domaincontaining protein | 2e-7 | At5g64470 | unknown protein | O.I. | H.G. | S.X. | |
| 0.24 | 22.4 | Os08g0462700 | At1g29195 | - | Conserved hypothetical protein | 3e-16 | At5g20540 | ATBRXL4 (BREVIS RADIX-LIKE 4) | O.I. | H.G. | S.X. | |
| 0.23 | 21.2 | Os10g0394400 | At1g29195 | - | Leucine-rich repeat, typical subtype containingprotein | 6e-1 | At5g56200 | zinc finger (C2H2 type) family protein | O.I. | H.G. | S.X. | |
| 0.20 | 16.5 | Os04g0536500 | At1g29195 | - | NAM protein | 1e-8 | At1g12260 | ANAC007 (ARABIDOPSIS NAC 007) | O.I. | H.G. | S.X. | |
| 0.19 | 15.1 | Os10g0560700 | At1g29195 | - | Pathogenesis-related transcriptional factor andERF domain containing protein | 2e-2 | At3g06870 | proline-rich family protein | O.I. | H.G. | S.X. | |
| 0.17 | 12.6 | Os07g0667400 | At1g29195 | - | SAM (and some other nucleotide) binding motifdomain containing protein | 1e-2 | At3g45240 | GRIK1 (GEMINIVIRUS REP INTERACTING KINASE 1) | O.I. | H.G. | S.X. | |
| 0.16 | 11.3 | Os07g0570600 | At1g29195 | - | Plastocyanin-like domain containing protein | 6e+0 | Atcg00750 | - | O.I. | H.G. | S.X. | |
| 0.14 | 9.3 | Os03g0765000 | At1g29195 | - | Serine/threonine-protein kinase 12 (EC 2.7.1.37)(Aurora-B) (Fragment) | 8e-2 | At2g45490 | AtAUR3 (ATAURORA3) | O.I. | H.G. | S.X. | |
| 0.14 | 9.3 | Os01g0384300 | At1g29195 | - | Protein kinase domain containing protein | 1e-9 | At2g48010 | RKF3 (RECEPTOR-LIKE KINASE IN IN FLOWERS 3) | O.I. | H.G. | S.X. | |
| 0.13 | 8.2 | Os06g0610500 | At1g29195 | - | Seven transmembrane protein Mlo7 | 3e-13 | At4g02600 | MLO1 | O.I. | H.G. | S.X. | |
| 0.12 | 7.2 | Os04g0438400 | At1g29195 | - | Pectin methylesterase-like protein | 5e-2 | At4g02330 | ATPMEPCRB | O.I. | H.G. | S.X. | |
| 0.12 | 7.2 | Os10g0446100 | At1g29195 | - | Conserved hypothetical protein | 6e-5 | At4g22420 | - | O.I. | H.G. | S.X. | |
| 0.11 | 6.5 | Os03g0850300 | At1g29195 | - | Sterile alpha motif homology 2 domain containingprotein | 4e-1 | At1g05420 | OFP12 (OVATE FAMILY PROTEIN 12) | O.I. | H.G. | S.X. | |
| 0.09 | 4.9 | Os05g0269500 | At1g29195 | - | Hypothetical protein | 5e-6 | At4g11720 | HAP2 (HAPLESS 2) | O.I. | H.G. | S.X. | |
| 0.06 | 3.0 | Os01g0953400 | At1g29195 | - | Conserved hypothetical protein | 2e+0 | At1g21880 | LYM1 (LYSM DOMAIN GPI-ANCHORED PROTEIN 1 PRECURSOR) | O.I. | H.G. | S.X. | |
| 0.05 | 2.5 | Os06g0703300 | At1g29195 | - | Protein of unknown function DUF594 family protein | 1e+0 | At4g19080 | unknown protein | O.I. | H.G. | S.X. | |
| 0.04 | 2.0 | Os04g0465800 | At1g29195 | - | - | 6e-1 | At2g35640 | hydroxyproline-rich glycoprotein family protein | O.I. | H.G. | S.X. | |
| 0.03 | 1.4 | Os01g0727100 | At1g29195 | - | Glycosyl transferase, family 8 protein | 3e-1 | At3g01513 | unknown protein | O.I. | H.G. | S.X. | |
| 0.02 | 1.0 | Os01g0228800 | At1g29195 | - | Conserved hypothetical protein | 6e+0 | At5g33370 | GDSL-motif lipase/hydrolase family protein | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
Back to the CoP portal site
Back to the KAGIANA project homepage