Co-expression analysis

Gene ID Zm.17352.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g53030: unknown protein (HF=4e+0)
Module size 6 genes
NF 0.11
%ile 6.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6381.10.92Zm.17352.1.A1_atCF636500--4e+0At5g53030unknown proteinO.I.H.G.S.X.
0.4455.70.93Zm.2928.1.S1_atBG265909ATP binding protein-1e+1At5g35090unknown proteinO.I.H.G.S.X.
0.147.70.91Zm.18025.1.S1_atAY521228.1osmotic stimulation MAPK-7e-2At1g18040CDKD1O.I.H.G.S.X.
0.104.60.93Zm.8677.1.A1_atCO531412structural constituent of ribosome-2e-1At3g26147unknown proteinO.I.H.G.S.X.
0.051.90.92Zm.5851.15.A1_x_atAI759130--9e-1At2g04031-O.I.H.G.S.X.
0.041.50.92Zm.17783.1.S1_atCK370693ML domain protein-1e-1At1g75550glycine-rich proteinO.I.H.G.S.X.

VF%ileCCGene IDRepr. IDGene nameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.3538.90.89Zm.17339.2.A1_x_atCF633149--2e-1At2g18110elongation factor 1-beta, putative / EF-1-beta, putativeO.I.H.G.S.X.
0.3336.00.91Zm.15812.1.S1_atCD445752--7e+0At2g01350QPT (QUINOLINATE PHOSHORIBOSYLTRANSFERASE)O.I.H.G.S.X.
0.2928.10.90Zm.793.1.A1_atBM416836hypothetical protein LOC100280321-4e-27At2g43750OASB (O-ACETYLSERINE (THIOL) LYASE B)O.I.H.G.S.X.
0.2928.10.91Zm.8662.1.A1_atCB350665PGPS/D12-7e+0At4g07390PQ-loop repeat family protein / transmembrane family proteinO.I.H.G.S.X.
0.2724.60.93Zm.10111.1.A1_atBM380307hypothetical protein LOC100217307-9e+0At4g30180transcription factor/ transcription regulatorO.I.H.G.S.X.
0.2216.90.90Zm.7639.1.A1_atBM079291--1e-23At5g12190RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.2216.90.91Zm.13944.1.A1_atAF332181.1beta-expansin 8-5e-2At5g55650unknown proteinO.I.H.G.S.X.
0.2115.50.91Zm.1951.1.S1_atBE123243Hypothetical protein LOC100191706-2e+0At5g49020PRMT4A (PROTEIN ARGININE METHYLTRANSFERASE 4A)O.I.H.G.S.X.
0.2014.20.87Zm.17255.1.A1_atCK144641--6e+0At2g46930pectinacetylesterase, putativeO.I.H.G.S.X.
0.2014.20.89Zm.16771.1.A1_atAI833437hypothetical protein LOC100273067-6e-21At2g34300dehydration-responsive protein-relatedO.I.H.G.S.X.


Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.798.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.298.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.098.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.697.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.497.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.391.7GSM205423B73xMo17 19 DAP endosperm tissue biological replicate 1GSE8278Non-additive and imprinted gene expression in hybrid maize endosperm_19DAPLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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