Co-expression analysis

Gene ID Zm.17352.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At5g53030: unknown protein (HF=4e+0)
Module size 6 genes
NF 0.11
%ile 6.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6381.10.92Zm.17352.1.A1_atCF636500--4e+0At5g53030unknown proteinO.I.H.G.S.X.
0.4455.70.93Zm.2928.1.S1_atBG265909ATP binding protein-1e+1At5g35090unknown proteinO.I.H.G.S.X.
0.147.70.91Zm.18025.1.S1_atAY521228.1osmotic stimulation MAPK-7e-2At1g18040CDKD1O.I.H.G.S.X.
0.104.60.93Zm.8677.1.A1_atCO531412structural constituent of ribosome-2e-1At3g26147unknown proteinO.I.H.G.S.X.
0.051.90.92Zm.5851.15.A1_x_atAI759130--9e-1At2g04031-O.I.H.G.S.X.
0.041.50.92Zm.17783.1.S1_atCK370693ML domain protein-1e-1At1g75550glycine-rich proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
9.798.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.298.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.098.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.697.9GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.497.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.397.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.391.7GSM205423B73xMo17 19 DAP endosperm tissue biological replicate 1GSE8278Non-additive and imprinted gene expression in hybrid maize endosperm_19DAPLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, GmaAffx.90612.1.S1_s_at, orthologous to the query gene, Zm.17352.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9499.2GmaAffx.90612.1.S1_s_atAt5g53030--2e-14At5g63470NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4)O.I.H.G.S.X.
0.5172.3GmaAffx.81094.1.S1_atAt5g53030--8e-8At4g33060peptidyl-prolyl cis-trans isomerase cyclophilin-type family proteinO.I.H.G.S.X.
0.4563.9GmaAffx.33620.2.S1_atAt5g53030--2e-14At1g51730RWD domain-containing proteinO.I.H.G.S.X.
0.4463.3GmaAffx.91054.1.S1_s_atAt5g53030--2e-8At1g04230unknown proteinO.I.H.G.S.X.
0.4259.3GmaAffx.68992.1.S1_atAt5g53030--3e-29At1g18450ATARP4O.I.H.G.S.X.
0.3954.5Gma.9020.2.S1_atAt5g53030--1e-14At2g43970La domain-containing proteinO.I.H.G.S.X.
0.3751.7GmaAffx.92872.1.S1_s_atAt5g53030--3e-51At1g13950ELF5A-1 (EUKARYOTIC ELONGATION FACTOR 5A-1)O.I.H.G.S.X.
0.3650.8GmaAffx.92769.1.S1_s_atAt5g53030--1e-75At3g19760eukaryotic translation initiation factor 4A, putative / eIF-4A, putative / DEAD box RNA helicase, putativeO.I.H.G.S.X.
0.3650.8GmaAffx.34491.1.S1_atAt5g53030--9e-13At1g16360LEM3 (ligand-effect modulator 3) family protein / CDC50 family proteinO.I.H.G.S.X.
0.3548.6Gma.4995.2.S1_atAt5g53030--3e-4At5g13020emsy N terminus domain-containing protein / ENT domain-containing proteinO.I.H.G.S.X.
0.3447.2GmaAffx.82078.1.S1_atAt5g53030--1e-27At3g26420ATRZ-1AO.I.H.G.S.X.
0.3346.1GmaAffx.93491.1.S1_s_atAt5g53030--3e-1At4g38280unknown proteinO.I.H.G.S.X.
0.3142.2GmaAffx.67734.1.S1_atAt5g53030--1e-6At5g38600proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family proteinO.I.H.G.S.X.
0.3040.4GmaAffx.91054.1.S1_atAt5g53030--2e-8At1g04230unknown proteinO.I.H.G.S.X.
0.2939.0GmaAffx.59560.1.S1_atAt5g53030--9e-7At1g17080unknown proteinO.I.H.G.S.X.
0.2939.0GmaAffx.24734.1.S1_atAt5g53030--3e+0At3g48350cysteine proteinase, putativeO.I.H.G.S.X.
0.2735.7Gma.1417.1.S1_atAt5g5303014-3-3 related protein SGF14B-2e-31At5g10450GRF6 (G-box regulating factor 6)O.I.H.G.S.X.
0.2735.7GmaAffx.56355.1.S1_s_atAt5g53030--6e-2At2g01310unknown proteinO.I.H.G.S.X.
0.2532.6GmaAffx.86434.1.S1_s_atAt5g53030--3e-25At3g13570SCL30aO.I.H.G.S.X.
0.2430.9GmaAffx.39028.1.S1_atAt5g53030--4e-8At4g26000PEP (PEPPER)O.I.H.G.S.X.
0.2126.6GmaAffx.80513.1.S1_atAt5g53030--2e-2At3g04610FLK (flowering locus KH domain)O.I.H.G.S.X.
0.2126.6Gma.1651.1.S1_atAt5g53030--4e-1At3g17880ATTDX (TETRATICOPEPTIDE DOMAIN-CONTAINING THIOREDOXIN)O.I.H.G.S.X.
0.1417.5Gma.8911.1.S1_atAt5g53030--5e-10At1g80930MIF4G domain-containing protein / MA3 domain-containing proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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