| Gene ID | Zm.17316.1.A1_at |
| Gene name | |
| Homology with Arabidopsis | Similar to At5g38317: LCR58 (Low-molecular-weight cysteine-rich 58) (HF=4e+0) |
| Module size | 6 genes |
| NF | 0.51 |
| %ile | 65.8 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.44 | 55.7 | 0.99 | Zm.17316.1.A1_at | CK369406 | - | - | 4e+0 | At5g38317 | LCR58 (Low-molecular-weight cysteine-rich 58) | O.I. | H.G. | S.X. | |
| 0.77 | 92.1 | 0.99 | Zm.405.1.A1_at | AF037034.2 | hypothetical LOC541674 | - | 2e-1 | At5g05340 | peroxidase, putative | O.I. | H.G. | S.X. | |
| 0.63 | 81.1 | 0.99 | Zm.13859.1.S1_at | AF439724.1 | methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cylcohydrolase isoform 1 | - | 1e-12 | At3g12290 | tetrahydrofolate dehydrogenase/cyclohydrolase, putative | O.I. | H.G. | S.X. | |
| 0.50 | 65.7 | 0.99 | Zm.6076.1.A1_a_at | AY111015.1 | COX VIIa-like protein | - | 3e-1 | At2g21195 | unknown protein | O.I. | H.G. | S.X. | |
| 0.42 | 51.3 | 0.99 | Zm.5357.1.S1_at | AI619398 | hypothetical protein LOC100273070 | - | 8e-4 | At1g03110 | transducin family protein / WD-40 repeat family protein | O.I. | H.G. | S.X. | |
| 0.29 | 28.1 | 0.99 | Zm.2952.1.A1_a_at | CF629660 | hypothetical protein LOC100192920 | - | 2e-3 | At3g26680 | SNM1 (SENSITIVE TO NITROGEN MUSTARD 1) | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 11.1 | 98.5 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 9.5 | 98.3 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 9.1 | 98.2 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.5 | 98.1 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.3 | 98.0 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.9 | 97.9 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.7 | 97.9 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.2 | 97.8 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.4 | 97.0 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.2 | 94.5 | GSM323170 | Zm_SG200Dpep1_24hpi_I | GSE12892 | Maize gene expression during infection with Ustilago maydis strain SG200Dpep1 | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.61 | 78.7 | HZ01P19u_at | At5g38317 | - | - | 1e+0 | At2g27390 | proline-rich family protein | O.I. | H.G. | S.X. | |
| 0.29 | 35.5 | Contig6316_s_at | At5g38317 | - | - | 8e+0 | At5g63905 | unknown protein | O.I. | H.G. | S.X. | |
| 0.29 | 35.5 | Contig10816_at | At5g38317 | - | - | 2e+0 | At3g09160 | RNA recognition motif (RRM)-containing protein | O.I. | H.G. | S.X. | |
| 0.28 | 35.5 | Contig10596_at | At5g38317 | - | - | 8e-10 | At5g63870 | PP7 (SERINE/THREONINE PHOSPHATASE 7) | O.I. | H.G. | S.X. | |
| 0.23 | 26.1 | Contig6403_at | At5g38317 | - | - | 1e-2 | At1g14510 | AL7 (ALFIN-LIKE 7) | O.I. | H.G. | S.X. | |
| 0.20 | 21.1 | Contig18307_at | At5g38317 | - | - | 3e-2 | At4g00810 | 60S acidic ribosomal protein P1 (RPP1B) | O.I. | H.G. | S.X. | |
| 0.16 | 15.3 | HK06I18r_at | At5g38317 | - | - | 1e+0 | At2g40475 | unknown protein | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Oryza_sativa |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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