Co-expression analysis

Gene ID Zm.17301.1.A1_at
Gene name hypothetical protein LOC100272664
Homology with ArabidopsisSimilar to At4g32570: TIFY8 (TIFY DOMAIN PROTEIN 8) (HF=5e-1)
Module size 9 genes
NF 0.19
%ile 14.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6481.70.92Zm.17301.1.A1_atCF624899hypothetical protein LOC100272664-5e-1At4g32570TIFY8 (TIFY DOMAIN PROTEIN 8)O.I.H.G.S.X.
0.3029.80.94Zm.4099.2.S1_atAI770849Hypothetical protein LOC100191159-8e-1At2g38870protease inhibitor, putativeO.I.H.G.S.X.
0.2216.90.96Zm.14508.1.S1_atBM349650--2e-7At1g22620ATSAC1 (suppressor of actin 1)O.I.H.G.S.X.
0.2115.50.95Zm.14048.1.A1_atCD446343hypothetical protein LOC100191672-5e-30At3g02630acyl-(acyl-carrier-protein) desaturase, putative / stearoyl-ACP desaturase, putativeO.I.H.G.S.X.
0.1811.60.95Zm.627.1.A1_atAF244689.2glutathione S-transferase GST 24-2e+0At1g17190ATGSTU26 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 26)O.I.H.G.S.X.
0.1811.60.96Zm.18403.1.A1_atBM072852hypothetical protein LOC100274307-5e-3At5g381204-coumarate--CoA ligase family protein / 4-coumaroyl-CoA synthase family proteinO.I.H.G.S.X.
0.136.80.95Zm.8478.2.A1_x_atBM381399hypothetical protein LOC100275408-1e+0At3g27890NQR (NADPH:QUINONE OXIDOREDUCTASE)O.I.H.G.S.X.
0.115.30.94Zm.3614.1.S1_atBM332537hypothetical protein LOC100277725-8e+0At5g19250unknown proteinO.I.H.G.S.X.
0.104.60.94Zm.12719.1.S1_atAF545811.1bromodomain protein 103-1e-57At1g05910cell division cycle protein 48-related / CDC48-relatedO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
20.599.3GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
19.299.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.899.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.598.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.098.5GSM253254ZM_24h_SG200_3inf_IIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
9.798.3GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.598.3GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.398.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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