| Gene ID | Zm.17272.1.S1_at |
| Gene name | |
| Homology with Arabidopsis | Similar to At2g41190: amino acid transporter family protein (HF=8e-6) |
| Module size | 6 genes |
| NF | 0.10 |
| %ile | 5.8 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.73 | 89.9 | 0.87 | Zm.17272.1.S1_at | CK371238 | - | - | 8e-6 | At2g41190 | amino acid transporter family protein | O.I. | H.G. | S.X. | |
| 0.33 | 36.0 | 0.87 | Zm.12177.1.A1_at | BM380114 | hypothetical protein LOC100193797 | - | 3e-1 | At2g05752 | unknown protein | O.I. | H.G. | S.X. | |
| 0.25 | 21.3 | 0.89 | Zm.8037.1.A1_at | BM073083 | - | - | 1e+0 | At5g58580 | ATL63 (ARABIDOPSIS TÓ | O.I. | H.G. | S.X. | |
| 0.23 | 18.6 | 0.87 | Zm.8348.1.A1_at | BM073795 | Hypothetical protein LOC100193915 | - | 3e-1 | At3g20750 | zinc finger (GATA type) family protein | O.I. | H.G. | S.X. | |
| 0.07 | 2.9 | 0.83 | Zm.4265.1.A1_at | CA402796 | - | - | 2e+0 | At1g12710 | AtPP2-A12 (Phloem protein 2-A12) | O.I. | H.G. | S.X. | |
| 0.02 | 0.7 | 0.84 | Zm.13739.1.S1_at | AY106154.1 | hypothetical protein LOC100273644 | - | 3e+0 | At5g15390 | tRNA/rRNA methyltransferase (SpoU) family protein | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 19.3 | 99.3 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 16.2 | 99.0 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 12.5 | 98.7 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.8 | 98.1 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.6 | 98.1 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.1 | 98.0 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 6.4 | 97.5 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.6 | 97.1 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.5 | 97.1 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 3.2 | 94.5 | GSM202298 | B73 immature ear tissue, biological replicate 2 | GSE8176 | Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.98 | 100.0 | Os02g0788800 | At2g41190 | - | Amino acid/polyamine transporter II family protein | 1e-5 | At2g41190 | amino acid transporter family protein | O.I. | H.G. | S.X. | |
| 0.32 | 36.3 | Os02g0745600 | At2g41190 | - | Conserved hypothetical protein | 4e+0 | Atmg00650 | - | O.I. | H.G. | S.X. | |
| 0.30 | 32.7 | Os04g0436100 | At2g41190 | - | Thioesterase superfamily domain containing protein | 8e+0 | At1g12900 | GAPA-2 (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE A SUBUNIT 2) | O.I. | H.G. | S.X. | |
| 0.28 | 31.1 | Os01g0264500 | At2g41190 | - | Conserved hypothetical protein | 4e-4 | At5g18250 | unknown protein | O.I. | H.G. | S.X. | |
| 0.27 | 27.5 | Os03g0626800 | At2g41190 | - | - | 2e-50 | At5g55990 | CBL2 (CALCINEURIN B-LIKE 2) | O.I. | H.G. | S.X. | |
| 0.26 | 25.6 | Os01g0528800 | At2g41190 | - | Cinnamyl alcohol dehydrogenase | 2e-1 | At5g19440 | cinnamyl-alcohol dehydrogenase, putative (CAD) | O.I. | H.G. | S.X. | |
| 0.22 | 19.4 | Os02g0735900 | At2g41190 | - | The start codon is not identified. | 2e+0 | At1g68070 | zinc finger (C3HC4-type RING finger) family protein | O.I. | H.G. | S.X. | |
| 0.22 | 19.4 | Os07g0232200 | At2g41190 | - | Cytochrome b5 domain containing protein | 4e-8 | At5g09680 | cytochrome b5 domain-containing protein | O.I. | H.G. | S.X. | |
| 0.21 | 17.9 | Os02g0743500 | At2g41190 | - | EDR1 | 9e-21 | At1g73660 | protein kinase family protein | O.I. | H.G. | S.X. | |
| 0.20 | 16.5 | Os03g0309000 | At2g41190 | - | Conserved hypothetical protein | 9e-16 | At3g62370 | unknown protein | O.I. | H.G. | S.X. | |
| 0.20 | 16.5 | Os01g0857700 | At2g41190 | - | Cell cycle control protein cwf14 | 2e-19 | At4g21110 | G10 family protein | O.I. | H.G. | S.X. | |
| 0.20 | 16.5 | Os04g0455800 | At2g41190 | - | Lipoic acid synthetase, mitochondrial precursor(Lip-syn) (Lipoate synthase) (mLIP1) | 6e-51 | At2g20860 | LIP1 (LIPOIC ACID SYNTHASE 1) | O.I. | H.G. | S.X. | |
| 0.19 | 15.1 | Os02g0201000 | At2g41190 | - | Conserved hypothetical protein | 7e-2 | At5g25360 | unknown protein | O.I. | H.G. | S.X. | |
| 0.19 | 15.1 | Os03g0120300 | At2g41190 | - | THH1 | 5e-14 | At1g14530 | THH1 (TOM THREE HOMOLOG 1) | O.I. | H.G. | S.X. | |
| 0.19 | 15.1 | Os06g0651600 | At2g41190 | - | Protein phosphatase type-2C | 6e-8 | At4g31860 | protein phosphatase 2C, putative / PP2C, putative | O.I. | H.G. | S.X. | |
| 0.19 | 15.1 | Os01g0141100 | At2g41190 | - | ATPase of the AAA+ class | 4e-52 | At2g27600 | SKD1 (SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1) | O.I. | H.G. | S.X. | |
| 0.18 | 13.7 | Os06g0232000 | At2g41190 | - | Hypothetical protein | 2e-4 | At5g39570 | unknown protein | O.I. | H.G. | S.X. | |
| 0.17 | 12.6 | Os08g0424200 | At2g41190 | - | Methylcrotonyl-CoA carboxylase beta chain,mitochondrial precursor (EC 6.4.1.4)(3-Methylcrotonyl-CoA carboxylase 2) (MCCase betasubunit) (3-methylcrotonyl-CoA:carbon dioxide ligase betasubunit) | 2e-26 | At4g34030 | MCCB (3-METHYLCROTONYL-COA CARBOXYLASE) | O.I. | H.G. | S.X. | |
| 0.17 | 12.6 | Os08g0301500 | At2g41190 | - | Sucrose-phosphate synthase 2 (EC 2.4.1.14)(Fragment) | 2e-31 | At5g20280 | ATSPS1F (sucrose phosphate synthase 1F) | O.I. | H.G. | S.X. | |
| 0.17 | 12.6 | Os02g0655700 | At2g41190 | - | Amino acid/polyamine transporter I family protein | 2e-17 | At1g05940 | CAT9 (CATIONIC AMINO ACID TRANSPORTER 9) | O.I. | H.G. | S.X. | |
| 0.16 | 11.3 | Os07g0548800 | At2g41190 | - | Protein of unknown function DUF538 family protein | 8e-1 | At5g03660 | unknown protein | O.I. | H.G. | S.X. | |
| 0.16 | 11.3 | Os12g0557400 | At2g41190 | - | Conserved hypothetical protein | 2e-12 | At3g62580 | - | O.I. | H.G. | S.X. | |
| 0.16 | 11.3 | Os11g0132400 | At2g41190 | - | Hypothetical protein | 2e+0 | At3g29170 | unknown protein | O.I. | H.G. | S.X. | |
| 0.16 | 11.3 | Os06g0215200 | At2g41190 | - | Zn-finger, U1-like domain containing protein | 2e-7 | At1g49590 | formin-binding protein-related | O.I. | H.G. | S.X. | |
| 0.15 | 10.3 | Os03g0638800 | At2g41190 | - | Protein kinase domain containing protein | 2e-32 | At3g22750 | protein kinase, putative | O.I. | H.G. | S.X. | |
| 0.14 | 9.3 | Os02g0521300 | At2g41190 | - | C2 domain containing protein | 4e-16 | At5g07300 | BON2 (BONZAI 2) | O.I. | H.G. | S.X. | |
| 0.14 | 9.3 | Os07g0531600 | At2g41190 | - | Phospholipid/glycerol acyltransferase familyprotein | 4e-18 | At5g60620 | phospholipid/glycerol acyltransferase family protein | O.I. | H.G. | S.X. | |
| 0.14 | 9.3 | Os06g0127000 | At2g41190 | - | Peroxisomal biogenesis factor 11 family protein | 7e-16 | At2g45740 | PEX11D | O.I. | H.G. | S.X. | |
| 0.14 | 9.3 | Os11g0433200 | At2g41190 | - | Peptidase A22B, minor histocompatibility antigenH13 family protein | 5e-3 | At1g01650 | aspartic-type endopeptidase/ peptidase | O.I. | H.G. | S.X. | |
| 0.13 | 8.2 | Os06g0308100 | At2g41190 | - | Dual specificity protein phosphatase familyprotein | 1e-8 | At2g04550 | IBR5 (INDOLE-3-BUTYRIC ACID RESPONSE 5) | O.I. | H.G. | S.X. | |
| 0.12 | 7.2 | Os03g0775500 | At2g41190 | - | Protein of unknown function DUF59 domaincontaining protein | 6e+0 | At5g28610 | - | O.I. | H.G. | S.X. | |
| 0.11 | 6.5 | Os02g0634900 | At2g41190 | - | Proteasome subunit alpha type 2 (EC 3.4.25.1) (20Sproteasome alpha subunit B) (20S proteasome subunitalpha-2) | 2e-59 | At1g16470 | PAB1 (PROTEASOME SUBUNIT PAB1) | O.I. | H.G. | S.X. | |
| 0.11 | 6.5 | Os03g0707900 | At2g41190 | - | Toc64 | 2e-2 | At5g09420 | ATTOC64-V (ARABIDOPSIS THALIANA TRANSLOCON AT THE OUTER MEMBRANE OF CHLOROPLASTS 64-V) | O.I. | H.G. | S.X. | |
| 0.10 | 5.7 | Os03g0784900 | At2g41190 | - | Conserved hypothetical protein | 1e-1 | At2g34690 | ACD11 (ACCELERATED CELL DEATH 11) | O.I. | H.G. | S.X. | |
| 0.10 | 5.7 | Os02g0598300 | At2g41190 | - | Hypothetical protein | 8e-1 | At5g23040 | CDF1 (CELL GROWTH DEFECT FACTOR 1) | O.I. | H.G. | S.X. | |
| 0.09 | 4.9 | Os03g0240700 | At2g41190 | - | Conserved hypothetical protein | 7e-3 | At3g17780 | unknown protein | O.I. | H.G. | S.X. | |
| 0.09 | 4.9 | Os07g0647800 | At2g41190 | - | Conserved hypothetical protein | 2e-7 | At1g63900 | zinc finger (C3HC4-type RING finger) family protein | O.I. | H.G. | S.X. | |
| 0.08 | 4.2 | Os12g0538500 | At2g41190 | - | PGPD14 protein | 7e-4 | At3g62970 | protein binding / zinc ion binding | O.I. | H.G. | S.X. | |
| 0.08 | 4.2 | Os03g0820600 | At2g41190 | - | Actin-depolymerizing factor 3 (ADF 3) (ZmABP3)(ZmADF3) | 3e-2 | At3g46000 | ADF2 (ACTIN DEPOLYMERIZING FACTOR 2) | O.I. | H.G. | S.X. | |
| 0.08 | 4.2 | Os10g0444400 | At2g41190 | - | Appr-1-p processing domain containing protein | 1e-28 | At1g69340 | appr-1-p processing enzyme family protein | O.I. | H.G. | S.X. | |
| 0.06 | 3.0 | Os08g0282000 | At2g41190 | - | CD9/CD37/CD63 antigen family protein | 3e-3 | At1g32400 | TOM2A (TOBAMOVIRUS MULTIPLICATION 2A) | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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