| Gene ID | Zm.17215.1.A1_at |
| Gene name | RING zinc finger protein-like |
| Homology with Arabidopsis | Similar to At5g51440: 23.5 kDa mitochondrial small heat shock protein (HSP23.5-M) (HF=2e+0) |
| Module size | 6 genes |
| NF | 0.43 |
| %ile | 51.2 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.63 | 81.1 | 0.91 | Zm.17215.1.A1_at | CO523350 | RING zinc finger protein-like | - | 2e+0 | At5g51440 | 23.5 kDa mitochondrial small heat shock protein (HSP23.5-M) | O.I. | H.G. | S.X. | |
| 0.55 | 71.6 | 0.94 | Zm.14396.1.S1_at | AF147726.1 | photosystem I subunit d1 | - | 1e-3 | At1g03130 | PSAD-2 (photosystem I subunit D-2) | O.I. | H.G. | S.X. | |
| 0.53 | 69.1 | 0.94 | Zm.19061.1.A1_at | CO532046 | hypothetical protein LOC100193436 | - | 5e+0 | At3g62370 | unknown protein | O.I. | H.G. | S.X. | |
| 0.50 | 65.7 | 0.95 | Zm.15432.1.S1_at | CA401222 | - | - | 9e+0 | At5g02080 | DNA/panthothenate metabolism flavoprotein family protein | O.I. | H.G. | S.X. | |
| 0.23 | 18.6 | 0.94 | Zm.33.1.S1_s_at | M12144.1 | alpha zein 19kDa D1 /// alpha zein 19kDa D2 /// hypothetical protein LOC100101516 /// z1D alpha zein protein /// z1D alpha zein protein /// z1D alpha zein protein /// z1D alpha zein protein /// z1A alpha zein protein | - | 7e-1 | At1g18265 | unknown protein | O.I. | H.G. | S.X. | |
| 0.21 | 15.5 | 0.94 | Zm.6106.1.S1_at | AI670203 | - | - | 8e-1 | At5g37370 | ATSRL1 | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 10.5 | 98.4 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 10.3 | 98.4 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 9.5 | 98.3 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.8 | 98.1 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.5 | 98.1 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.3 | 98.0 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.0 | 96.7 | GSM320444 | protocol: mRNA - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.3 | 96.1 | GSM375788 | Deep-sowing 10d treatment Control, biological rep1 | GSE15048 | Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition | |
| 4.3 | 96.1 | GSM375795 | Deep-sowing 10d treatment Control, biological rep2 | GSE15048 | Gibberellin-induced gene expression in maize mesocotyl under deep-sowing condition | |
| 3.4 | 94.9 | GSM385710 | Deep-sowing 10d treatment TIBA, biological rep2 | GSE15371 | Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowing | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.71 | 89.6 | Os08g0157400 | At5g51440 | - | Zn-finger, RING domain containing protein | 4e-2 | At5g07600 | oleosin / glycine-rich protein | O.I. | H.G. | S.X. | |
| 0.44 | 58.1 | Os03g0651100 | At5g51440 | - | Rhomboid-like protein family protein | 5e-1 | At3g58460 | ATRBL15 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 15) | O.I. | H.G. | S.X. | |
| 0.29 | 31.1 | Os01g0238200 | At5g51440 | - | Conserved hypothetical protein | 5e+0 | At5g57150 | basic helix-loop-helix (bHLH) family protein | O.I. | H.G. | S.X. | |
| 0.22 | 19.4 | Os11g0265000 | At5g51440 | - | Uridine kinase family protein | 1e-55 | At4g26510 | ATP binding / kinase/ phosphotransferase, alcohol group as acceptor / uracil phosphoribosyltransferase | O.I. | H.G. | S.X. | |
| 0.15 | 10.3 | Os11g0423800 | At5g51440 | - | Mitochondrial basic amino acid carrier | 4e-9 | At2g33820 | MBAC1 | O.I. | H.G. | S.X. | |
| 0.09 | 4.9 | Os09g0516500 | At5g51440 | - | 3-beta hydroxysteroid dehydrogenase/isomerasefamily protein | 9e-4 | At3g43930 | - | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
Back to the CoP portal site
Back to the KAGIANA project homepage