Co-expression analysis

Gene ID Zm.17215.1.A1_at
Gene name RING zinc finger protein-like
Homology with ArabidopsisSimilar to At5g51440: 23.5 kDa mitochondrial small heat shock protein (HSP23.5-M) (HF=2e+0)
Module size 6 genes
NF 0.43
%ile 51.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6381.10.91Zm.17215.1.A1_atCO523350RING zinc finger protein-like-2e+0At5g5144023.5 kDa mitochondrial small heat shock protein (HSP23.5-M)O.I.H.G.S.X.
0.5571.60.94Zm.14396.1.S1_atAF147726.1photosystem I subunit d1-1e-3At1g03130PSAD-2 (photosystem I subunit D-2)O.I.H.G.S.X.
0.5369.10.94Zm.19061.1.A1_atCO532046hypothetical protein LOC100193436-5e+0At3g62370unknown proteinO.I.H.G.S.X.
0.5065.70.95Zm.15432.1.S1_atCA401222--9e+0At5g02080DNA/panthothenate metabolism flavoprotein family proteinO.I.H.G.S.X.
0.2318.60.94Zm.33.1.S1_s_atM12144.1alpha zein 19kDa D1 /// alpha zein 19kDa D2 /// hypothetical protein LOC100101516 /// z1D alpha zein protein /// z1D alpha zein protein /// z1D alpha zein protein /// z1D alpha zein protein /// z1A alpha zein protein-7e-1At1g18265unknown proteinO.I.H.G.S.X.
0.2115.50.94Zm.6106.1.S1_atAI670203--8e-1At5g37370ATSRL1O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.598.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.598.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.898.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.598.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.096.7GSM320444protocol: mRNA - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.396.1GSM375788Deep-sowing 10d treatment Control, biological rep1GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing conditionLink to GEO
4.396.1GSM375795Deep-sowing 10d treatment Control, biological rep2GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing conditionLink to GEO
3.494.9GSM385710Deep-sowing 10d treatment TIBA, biological rep2GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowingLink to GEO

Inter-species module comparison

A co-expression module including the soybean gene, GmaAffx.87604.1.S1_at, orthologous to the query gene, Zm.17215.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.9298.9GmaAffx.87604.1.S1_atAt5g51440--9e-1At5g60360AALP (Arabidopsis aleurain-like protease)O.I.H.G.S.X.
0.6181.8GmaAffx.80600.1.S1_atAt5g51440--1e-3At4g08790nitrilase, putativeO.I.H.G.S.X.
0.4463.3GmaAffx.93137.1.S1_atAt5g51440--6e-15At5g49970ATPPOX (A. THALIANA PYRIDOXIN (PYRODOXAMINE) 5'-PHOSPHATE OXIDASE)O.I.H.G.S.X.
0.4259.3Gma.6941.2.S1_a_atAt5g51440--2e-4At3g07950rhomboid protein-relatedO.I.H.G.S.X.
0.3548.6Gma.4155.2.S1_s_atAt5g51440EREBP/AP2 transcription factor-1e-2At1g53887unknown proteinO.I.H.G.S.X.
0.3346.1GmaAffx.93138.1.S1_s_atAt5g51440--2e-27At2g32080PUR ALPHA-1O.I.H.G.S.X.
0.3243.7GmaAffx.59630.1.S1_x_atAt5g51440--2e-1At1g78870UBC35 (UBIQUITIN-CONJUGATING ENZYME 35)O.I.H.G.S.X.
0.3142.2GmaAffx.91636.1.S1_s_atAt5g51440--3e-63At1g57870ATSK42 (ARABIDOPSIS SHAGGY-LIKE KINASE 42)O.I.H.G.S.X.
0.3040.4Gma.4037.2.S1_s_atAt5g51440--1e-16At1g09840ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41)O.I.H.G.S.X.
0.2939.0Gma.5720.2.S1_a_atAt5g51440--2e-5At1g51200zinc finger (AN1-like) family proteinO.I.H.G.S.X.
0.2839.0GmaAffx.84653.1.S1_atAt5g51440--2e-2At5g01430Got1-like family proteinO.I.H.G.S.X.
0.2839.0GmaAffx.84244.1.S1_atAt5g51440--1e-11At5g53570RabGAP/TBC domain-containing proteinO.I.H.G.S.X.
0.2839.0Gma.14354.2.S1_atAt5g51440--3e-53At5g59840Ras-related GTP-binding family proteinO.I.H.G.S.X.
0.2633.9Gma.2892.2.S1_a_atAt5g51440--5e-47At1g29150ATS9 (ARABIDOPSIS NON-ATPASE SUBUNIT 9)O.I.H.G.S.X.
0.2532.6GmaAffx.93437.1.S1_s_atAt5g51440--3e-23At5g10780-O.I.H.G.S.X.
0.2329.9Gma.11321.3.S1_a_atAt5g51440--4e-49At1g20260hydrogen ion transporting ATP synthase, rotational mechanism / hydrolase, acting on acid anhydrides, catalyzing transmembrane movement of substances / proton-transporting ATPase, rotational mechanismO.I.H.G.S.X.
0.1822.3GmaAffx.73239.1.S1_atAt5g51440--9e-38At4g34460AGB1 (GTP BINDING PROTEIN BETA 1)O.I.H.G.S.X.
0.1822.3GmaAffx.38743.1.S1_atAt5g51440--4e-4At5g23340-O.I.H.G.S.X.
0.1619.7GmaAffx.29121.1.S1_atAt5g51440--1e+0At4g17310unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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