Co-expression analysis

Gene ID Zm.17215.1.A1_at
Gene name RING zinc finger protein-like
Homology with ArabidopsisSimilar to At5g51440: 23.5 kDa mitochondrial small heat shock protein (HSP23.5-M) (HF=2e+0)
Module size 6 genes
NF 0.43
%ile 51.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.6381.10.91Zm.17215.1.A1_atCO523350RING zinc finger protein-like-2e+0At5g5144023.5 kDa mitochondrial small heat shock protein (HSP23.5-M)O.I.H.G.S.X.
0.5571.60.94Zm.14396.1.S1_atAF147726.1photosystem I subunit d1-1e-3At1g03130PSAD-2 (photosystem I subunit D-2)O.I.H.G.S.X.
0.5369.10.94Zm.19061.1.A1_atCO532046hypothetical protein LOC100193436-5e+0At3g62370unknown proteinO.I.H.G.S.X.
0.5065.70.95Zm.15432.1.S1_atCA401222--9e+0At5g02080DNA/panthothenate metabolism flavoprotein family proteinO.I.H.G.S.X.
0.2318.60.94Zm.33.1.S1_s_atM12144.1alpha zein 19kDa D1 /// alpha zein 19kDa D2 /// hypothetical protein LOC100101516 /// z1D alpha zein protein /// z1D alpha zein protein /// z1D alpha zein protein /// z1D alpha zein protein /// z1A alpha zein protein-7e-1At1g18265unknown proteinO.I.H.G.S.X.
0.2115.50.94Zm.6106.1.S1_atAI670203--8e-1At5g37370ATSRL1O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.598.4GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.598.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.898.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.598.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.096.7GSM320444protocol: mRNA - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.396.1GSM375788Deep-sowing 10d treatment Control, biological rep1GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing conditionLink to GEO
4.396.1GSM375795Deep-sowing 10d treatment Control, biological rep2GSE15048Gibberellin-induced gene expression in maize mesocotyl under deep-sowing conditionLink to GEO
3.494.9GSM385710Deep-sowing 10d treatment TIBA, biological rep2GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowingLink to GEO

Inter-species module comparison

A co-expression module including the Arabidopsis gene, At5g51440, orthologous to the query gene, Zm.17215.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.O.I.H.G.S.X.Other DB
1.00100.0At5g5144083521823.5 kDa mitochondrial small heat shock protein (HSP23.5-M)F:molecular_function unknown;P:response to heat;C:unknown;BPOAFMO.I.H.G.S.X.
0.9597.0At2g20560816578DNAJ heat shock family proteinF:unfolded protein binding, heat shock protein binding;P:protein folding;C:cellular_component unknown;OBMFPAVO.I.H.G.S.X.
0.9396.4At1g0740083725217.8 kDa class I heat shock protein (HSP17.8-CI)F:unknown;P:response to oxidative stress, response to heat;C:unknown;BPOFAMO.I.H.G.S.X.
0.9396.4At1g74310843771ATHSP101 (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 101)Encodes ClpB1, which belongs to the Casein lytic proteinase/heat shock protein 100 (Clp/Hsp100) family. Involved in refolding of proteins which form aggregates under heat stress. Also known as AtHsp101. AtHsp101 is a cytosolic heat shock protein required for acclimation to high temperature.O.I.H.G.S.X.
0.9396.4At5g12030831076AT-HSP17.6A (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.6A)Encodes a cytosolic small heat shock protein with chaperone activity that is induced by heat and osmotic stress and is also expressed late in seed development.O.I.H.G.S.X.
0.9095.1At4g12400826849stress-inducible protein, putativeF:binding;P:response to high light intensity, response to hydrogen peroxide, response to heat, response to stress;C:cellular_component unknown;OBMPFAVO.I.H.G.S.X.
0.8994.6At3g24500822041MBF1C (MULTIPROTEIN BRIDGING FACTOR 1C)One of three genes in A. thaliana encoding multiprotein bridging factor 1, a highly conserved transcriptional coactivator. May serve as a bridging factor between a bZIP factor and TBP. Its expression is specifically elevated in response to pathogen infection, salinity, drought, heat, hydrogen peroxide, and application of abscisic acid or salicylic acid. Constitutive expression enhances the tolerance of transgenic plants to various biotic and abiotic stresses.O.I.H.G.S.X.
0.8994.6At3g46230823768ATHSP17.4member of the class I small heat-shock protein (sHSP) family, which accounts for the majority of sHSPs in maturing seedsO.I.H.G.S.X.
0.8994.6At2g2950081749917.6 kDa class I small heat shock protein (HSP17.6B-CI)F:molecular_function unknown;P:response to oxidative stress, response to cyclopentenone, response to high light intensity, response to hydrogen peroxide, response to heat;C:unknown;BPOFAMO.I.H.G.S.X.
0.8994.6At2g46240819232BAG6 (BCL-2-ASSOCIATED ATHANOGENE 6)A member of Arabidopsis BAG (Bcl-2-associated athanogene) proteins, plant homologs of mammalian regulators of apoptosis. Expression of BAG6 in leaves was strongly induced by heat stress. Knockout mutants exhibited enhanced susceptibility to fungal pathogen Botrytis cinerea. Plant BAG proteins are multi-functional and remarkably similar to their animal counterparts, as they regulate apoptotic-like processes ranging from pathogen attack, to abiotic stress, to plant development.O.I.H.G.S.X.
0.8894.0At5g12020831075HSP17.6II (17.6 KDA CLASS II HEAT SHOCK PROTEIN)F:unknown;P:response to heat;C:cellular_component unknown;BPOFAMO.I.H.G.S.X.
0.8894.0At5g25450832619ubiquinol-cytochrome C reductase complex 14 kDa protein, putativeF:ubiquinol-cytochrome-c reductase activity;P:mitochondrial electron transport, ubiquinol to cytochrome c;C:mitochondrion, mitochondrial respiratory chain complex III, membrane;MPFOO.I.H.G.S.X.
0.8894.0At5g48570834913peptidyl-prolyl cis-trans isomerase, putative / FK506-binding protein, putativeF:FK506 binding, peptidyl-prolyl cis-trans isomerase activity, calmodulin binding;P:protein folding;C:vacuole;BMOFPAO.I.H.G.S.X.
0.8793.5At1g5354084178917.6 kDa class I small heat shock protein (HSP17.6C-CI) (AA 1-156)F:unknown;P:response to heat;C:cellular_component unknown;BPOFAMO.I.H.G.S.X.
0.8592.4At5g52640835341ATHSP90.1 (HEAT SHOCK PROTEIN 90.1)Encodes a cytosolic heat shock protein AtHSP90.1. AtHSP90.1 interacts with disease resistance signaling components SGT1b and RAR1 and is required for RPS2-mediated resistance.O.I.H.G.S.X.
0.8491.9At1g30070839886SGS domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;MOPFO.I.H.G.S.X.
0.8391.4At2g26150817155ATHSFA2member of Heat Stress Transcription Factor (Hsf) family. Involved in response to misfolded protein accumulation in the cytosol. Regulated by alternative splicing and non-sense-mediated decay.O.I.H.G.S.X.
0.8391.4At2g32120817771HSP70T-2 (HEAT-SHOCK PROTEIN 70T-2)F:ATP binding;P:protein folding, response to high light intensity, response to hydrogen peroxide, response to heat;C:cellular_component unknown;OBMFPAVO.I.H.G.S.X.
0.8391.4At4g25200828623ATHSP23.6-MITO (MITOCHONDRION-LOCALIZED SMALL HEAT SHOCK PROTEIN 23.6)AtHSP23.6-mito mRNA, nuclear gene encoding mitochondrialO.I.H.G.S.X.
0.8089.8At3g09350820091armadillo/beta-catenin repeat family proteinF:binding;P:biological_process unknown;C:cellular_component unknown;MFPOO.I.H.G.S.X.
0.7586.9At5g3767083374615.7 kDa class I-related small heat shock protein-like (HSP15.7-CI)F:molecular_function unknown;P:response to heat;C:unknown;BPOFAMO.I.H.G.S.X.
0.5873.8At5g35320833486unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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