Co-expression analysis

Gene ID	Zm.17199.1.A1_at
Gene name	hypothetical protein LOC100191930
Homology with Arabidopsis	Similar to At3g27960: kinesin light chain-related (HF=2e-10)
Module size	18 genes
NF	0.29
%ile	26.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.92	99.2	0.99	Zm.17199.1.A1_at	CK370582	hypothetical protein LOC100191930	-	2e-10	At3g27960	kinesin light chain-related	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.99	Zm.942.1.A1_at	BF729545	seed maturation protein	-	3e-1	At2g33735	DNAJ heat shock N-terminal domain-containing protein	O.I.	H.G.	S.X.	Please select
0.43	52.8	0.99	ZmAffx.758.1.S1_at	AI746000	-	-	3e-3	At4g22260	IM (IMMUTANS)	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.99	Zm.13354.1.S1_s_at	AW067009	indole-3-acetic acid-amido synthetase GH3.8	-	4e-12	At2g14960	GH3.1	O.I.	H.G.	S.X.	Please select
0.37	42.3	0.99	Zm.13924.1.S1_at	U71123.1	thylakoid assembly1	-	2e-78	At4g01800	preprotein translocase secA subunit, putative	O.I.	H.G.	S.X.	Please select
0.34	37.2	0.99	ZmAffx.898.1.A1_at	AI770889	-	-	8e-1	At3g15280	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.99	ZmAffx.852.1.A1_at	AI770652	-	-	1e-11	At3g12690	AGC1.5 (AGC KINASE 1.5)	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.99	Zm.238.1.S1_at	CO523309	SBP-domain protein 4	-	4e-6	At1g02065	SPL8 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8)	O.I.	H.G.	S.X.	Please select
0.30	29.8	0.99	Zm.13669.2.A1_at	BM350396	-	-	2e-9	At4g02630	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.99	ZmAffx.406.9.A1_at	AI670512	-	-	1e+1	At5g16580	BGLU2 (BETA GLUCOSIDASE 2)	O.I.	H.G.	S.X.	Please select
0.25	21.3	1.00	Zm.1094.1.A1_at	BM339500	-	-	2e-5	At5g26210	AL4 (ALFIN-LIKE 4)	O.I.	H.G.	S.X.	Please select
0.24	19.8	0.99	Zm.8824.1.A1_at	BM347277	FK506-binding protein 4	-	2e-6	At3g55520	immunophilin, putative / FKBP-type peptidyl-prolyl cis-trans isomerase, putative	O.I.	H.G.	S.X.	Please select
0.24	19.8	0.99	Zm.3169.5.S1_a_at	AI739763	hypothetical protein LOC100279753 /// minichromosome maintenance protein	-	1e-1	At5g44635	minichromosome maintenance family protein / MCM family protein	O.I.	H.G.	S.X.	Please select
0.21	15.5	0.99	Zm.17818.1.A1_at	CK145213	-	-	6e+0	At5g52470	FIB1 (FIBRILLARIN 1)	O.I.	H.G.	S.X.	Please select
0.19	12.8	0.99	Zm.3889.2.A1_a_at	BM335204	hypothetical protein LOC100194114	-	9e-12	At3g55440	TPI (TRIOSEPHOSPHATE ISOMERASE)	O.I.	H.G.	S.X.	Please select
0.19	12.8	0.99	ZmAffx.208.1.S1_at	AI670216	-	-	6e-1	At5g15460	MUB2 (MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 2)	O.I.	H.G.	S.X.	Please select
0.19	12.8	0.99	Zm.2040.1.S1_at	BM338990	hypothetical protein LOC100194284	-	3e-3	At3g15355	UBC25 (UBIQUITIN-CONJUGATING ENZYME 25)	O.I.	H.G.	S.X.	Please select
0.17	10.6	0.99	Zm.9371.3.A1_x_at	BM333622	hypothetical protein LOC100275410	-	1e+0	At1g53160	SPL4 (SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 4)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.4	97.0	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.1	96.8	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.0	96.7	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.8	96.6	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.7	96.5	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.4	96.2	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.4	96.2	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.1	95.9	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.9	95.7	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.1	94.3	GSM202303	Mo17 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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