Co-expression analysis

Gene ID	Zm.17158.2.A1_at
Gene name
Homology with Arabidopsis	Similar to At5g47455: unknown protein (HF=3e+0)
Module size	11 genes
NF	0.42
%ile	48.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.61	79.5	0.96	Zm.17158.2.A1_at	BM267363	-	-	3e+0	At5g47455	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.97	Zm.13869.1.S1_x_at	AF099436.1	R2R3MYB-domain protein	-	4e+0	At2g04910	glycosyl hydrolase family protein 17	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.97	Zm.19173.1.A1_at	CO524394	-	-	5e+0	At4g33625	unknown protein	O.I.	H.G.	S.X.	Please select
0.57	75.1	0.97	Zm.13193.1.A1_at	CD991429	-	-	4e-6	At4g14990	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.97	Zm.4812.1.A1_at	BG873771	-	-	6e+0	At5g26220	ChaC-like family protein	O.I.	H.G.	S.X.	Please select
0.43	52.8	0.97	Zm.17516.1.S1_at	CF623514	hypothetical protein LOC100216611	-	3e-12	At5g63650	SNRK2.5 (SNF1-RELATED PROTEIN KINASE 2.5)	O.I.	H.G.	S.X.	Please select
0.40	48.5	0.97	Zm.3385.1.A1_at	AW066673	C2H2 zinc finger protein	-	7e-1	At4g18930	cyclic phosphodiesterase	O.I.	H.G.	S.X.	Please select
0.39	45.6	0.96	Zm.2895.10.S1_a_at	AI667767	-	-	7e-30	At4g14320	60S ribosomal protein L36a/L44 (RPL36aB)	O.I.	H.G.	S.X.	Please select
0.35	38.9	0.97	Zm.19304.1.A1_at	CO525321	hypothetical protein LOC100192965	-	3e-1	At1g55230	unknown protein	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.97	Zm.6333.1.A1_at	AY109180.1	transaminase/ transferase, transferring nitrogenous groups	-	5e-7	At4g33680	AGD2 (ABERRANT GROWTH AND DEATH 2)	O.I.	H.G.	S.X.	Please select
0.21	15.5	0.97	Zm.6228.1.A1_at	AI739920	-	-	1e+0	At1g64370	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
16.2	99.0	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.8	98.8	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.2	98.8	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.1	98.6	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.9	98.6	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.5	98.6	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.6	98.4	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.5	98.4	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.4	98.4	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.5	95.1	GSM320456	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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