Co-expression analysis

Gene ID	Zm.17102.1.A1_at
Gene name	Histone H3.2
Homology with Arabidopsis	Similar to At1g09200: histone H3 (HF=4e-29)
Module size	7 genes
NF	0.54
%ile	71.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.55	71.6	0.96	Zm.17102.1.A1_at	CD527578	Histone H3.2	-	4e-29	At1g09200	histone H3	O.I.	H.G.	S.X.	Please select
0.71	88.2	0.96	Zm.7150.3.S1_at	AY109249.1	-	-	2e+0	At3g29575	AFP3 (ABI FIVE BINDING PROTEIN 3)	O.I.	H.G.	S.X.	Please select
0.71	88.2	0.97	Zm.264.2.A1_x_at	CF012670	acetyl-coenzyme A carboxylase	-	8e+0	At5g02890	transferase family protein	O.I.	H.G.	S.X.	Please select
0.61	79.5	0.97	Zm.13539.1.A1_at	AY108296.1	-	-	5e+0	At2g13450	unknown protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.97	Zm.24.2.S1_at	AJ001635.1	viviparous1	-	3e+0	At2g40765	unknown protein	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.97	Zm.10865.1.A1_at	CF638037	hypothetical protein LOC100275271	-	1e-6	At2g44090	-	O.I.	H.G.	S.X.	Please select
0.34	37.2	0.97	Zm.6328.1.A1_at	AY104064.1	hypothetical protein LOC100279888	-	3e+0	At4g38060	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.1	95.9	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.8	95.5	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.8	95.5	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.0	94.0	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.8	93.5	GSM202299	Mo17xB73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.8	93.5	GSM202306	Mo17xB73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.8	93.5	GSM202296	B73xMo17 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.6	92.9	GSM202302	B73xMo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.6	92.9	GSM202307	B73xMo17 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.6	92.9	GSM202292	B73 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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