Co-expression analysis

Gene ID	Zm.1706.1.A1_at
Gene name	hypothetical protein LOC100276850
Homology with Arabidopsis	Similar to At5g47870: unknown protein (HF=1e+0)
Module size	6 genes
NF	0.54
%ile	71.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.98	Zm.1706.1.A1_at	BF728433	hypothetical protein LOC100276850	-	1e+0	At5g47870	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	77.8	0.98	Zm.3900.2.A1_at	BM267197	hypothetical protein LOC100191188	-	1e-17	At3g59580	RWP-RK domain-containing protein	O.I.	H.G.	S.X.	Please select
0.55	71.6	0.98	ZmAffx.1007.1.S1_at	AI881371	-	-	1e+1	At2g34570	MEE21 (maternal effect embryo arrest 21)	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.98	Zm.1042.1.A1_at	AY105661.1	-	-	3e-1	At2g25340	ATVAMP712 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 712)	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.98	Zm.9023.1.A1_at	AY109177.1	-	-	4e-14	At4g02480	AAA-type ATPase family protein	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.98	Zm.5654.1.A1_at	BG874013	hypothetical protein LOC100280184	-	5e-1	At5g61200	-	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
18.9	99.2	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.3	99.2	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.2	99.1	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.9	99.0	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.2	98.9	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.7	98.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.4	98.7	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.3	98.7	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.5	98.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.2	94.5	GSM320456	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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