Co-expression analysis

Gene ID Zm.17055.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g12665: - (HF=2e-2)
Module size 6 genes
NF 0.23
%ile 18.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5976.10.93Zm.17055.1.S1_atCF972499--2e-2At1g12665-O.I.H.G.S.X.
0.6179.50.94Zm.5787.2.S1_atAY107157.1hypothetical protein LOC100273050-4e-1At5g48790unknown proteinO.I.H.G.S.X.
0.4455.70.95Zm.7973.1.S1_atAY104213.1hypothetical protein LOC100273340-8e-9At2g35120glycine cleavage system H protein, mitochondrial, putativeO.I.H.G.S.X.
0.2521.30.95Zm.14039.3.S1_a_atAF113521.1plasminogen activator inhibitor 1 RNA-binding protein-2e-3At4g16830nuclear RNA-binding protein (RGGA)O.I.H.G.S.X.
0.2115.50.94Zm.8866.1.A1_atBM348347expansin-like 3-1e-2At4g38400ATEXLA2 (ARABIDOPSIS THALIANA EXPANSIN-LIKE A2)O.I.H.G.S.X.
0.083.40.94Zm.811.1.A1_atCA405132cathepsin B-like cysteine proteinase 3-2e-23At1g02305cathepsin B-like cysteine protease, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.298.6GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.898.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.997.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.497.0GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.596.3GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.094.0GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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