Co-expression analysis

Gene ID Zm.16959.2.A1_at
Gene name hypothetical protein LOC100274593
Homology with ArabidopsisSimilar to At3g46230: ATHSP17.4 (HF=1e-13)
Module size 27 genes
NF 0.48
%ile 59.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9499.50.97Zm.16959.2.A1_atCK347555hypothetical protein LOC100274593-1e-13At3g46230ATHSP17.4O.I.H.G.S.X.
0.7590.80.98Zm.1174.1.A1_atCA401542WNK6-1e-3At1g64630WNK10 (WITH NO LYSINE KINASE 10)O.I.H.G.S.X.
0.7490.30.98Zm.10593.1.A1_atBM380000hypothetical protein LOC100194168-1e+0At3g55350unknown proteinO.I.H.G.S.X.
0.6279.80.98Zm.3964.1.A1_a_atAF205603.1ferric-chelate reductase (NADH)2-1e-17At5g17770ATCBR (ARABIDOPSIS THALIANA NADH:CYTOCHROME B5 REDUCTASE 1)O.I.H.G.S.X.
0.5976.10.98Zm.1903.1.S1_atCD965960hypothetical protein LOC100274631-4e-4At2g4051040S ribosomal protein S26 (RPS26A)O.I.H.G.S.X.
0.5674.40.98Zm.4716.1.A1_atAI738149hypothetical protein LOC100193057-1e-1At4g37750ANT (AINTEGUMENTA)O.I.H.G.S.X.
0.5571.60.98Zm.5578.4.S1_atAI677290Hypothetical protein LOC100193656-4e+0At1g34910unknown proteinO.I.H.G.S.X.
0.5571.60.98Zm.1459.1.S1_atCK368035cold acclimation protein COR413-PM1-2e-1At4g37220stress-responsive protein, putativeO.I.H.G.S.X.
0.5469.80.98Zm.12454.1.A1_atCF629114hypothetical protein LOC100273736-6e-3At1g10640polygalacturonaseO.I.H.G.S.X.
0.5267.30.98ZmAffx.960.1.S1_atAI833639--3e+0At2g19640ASHR2 (ASH1-RELATED PROTEIN 2)O.I.H.G.S.X.
0.5267.30.99ZmAffx.533.1.S1_atAI711769--8e-1At5g11790Ndr family proteinO.I.H.G.S.X.
0.4961.90.99Zm.9948.1.A1_atCB3507883-N-debenzoyl-2-deoxytaxol N-benzoyltransferase-2e+0At1g54575unknown proteinO.I.H.G.S.X.
0.4861.30.98Zm.19275.1.A1_atBM080650hypothetical protein LOC100191349-3e-1At3g12390nascent polypeptide associated complex alpha chain protein, putative / alpha-NAC, putativeO.I.H.G.S.X.
0.4861.30.98ZmAffx.962.1.A1_atAI833777hypothetical protein LOC100275523-3e-22At1g64680unknown proteinO.I.H.G.S.X.
0.4759.90.98Zm.18971.1.A1_atCO534149--3e-8At2g25870haloacid dehalogenase-like hydrolase family proteinO.I.H.G.S.X.
0.4455.70.98Zm.17716.1.A1_a_atCK370089--4e+0At4g05010F-box family proteinO.I.H.G.S.X.
0.4352.80.98ZmAffx.954.1.S1_atAI833471--3e+0At1g26480GRF12 (GENERAL REGULATORY FACTOR 12)O.I.H.G.S.X.
0.3945.60.98Zm.11586.1.A1_atBM379136--6e+0Atmg00280-O.I.H.G.S.X.
0.3742.30.98Zm.13456.2.A1_atAY111230.1Hypothetical protein LOC100194201-5e+0At3g50520phosphoglycerate/bisphosphoglycerate mutase family proteinO.I.H.G.S.X.
0.3641.30.99Zm.15.1.A1_atAY271262.1NADP malic enzyme3-3e-16At1g79750ATNADP-ME4 (NADP-malic enzyme 4)O.I.H.G.S.X.
0.3641.30.98ZmAffx.589.1.A1_atAI715017--8e-1At5g53880unknown proteinO.I.H.G.S.X.
0.3641.30.99Zm.12526.1.A1_x_atAI734393--3e+0At1g58150unknown proteinO.I.H.G.S.X.
0.3437.20.98ZmAffx.1198.1.A1_atBE056195--2e-1At1g75040PR5 (PATHOGENESIS-RELATED GENE 5)O.I.H.G.S.X.
0.3029.80.98Zm.17625.1.A1_atCF631845--4e-23At1g10200WLIM1O.I.H.G.S.X.
0.2928.10.98Zm.3865.2.A1_atCF625226--5e-54At4g16155dihydrolipoyl dehydrogenaseO.I.H.G.S.X.
0.2521.30.99Zm.9952.1.A1_atBM349898--6e+0At5g46115unknown proteinO.I.H.G.S.X.
0.1710.60.99ZmAffx.917.1.S1_atAI782944--1e+1At5g26810pectinesterase family proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
15.398.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.798.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.298.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.998.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.998.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.598.4GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.098.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.198.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.497.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.893.5GSM320458protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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