Co-expression analysis

Gene ID Zm.16854.1.S1_at
Gene name hypothetical protein LOC100273231
Homology with ArabidopsisSimilar to At3g18220: phosphatidic acid phosphatase family protein / PAP2 family protein (HF=1e-1)
Module size 13 genes
NF 0.64
%ile 86.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5571.60.98Zm.16854.1.S1_atCF674957hypothetical protein LOC100273231-1e-1At3g18220phosphatidic acid phosphatase family protein / PAP2 family proteinO.I.H.G.S.X.
0.8395.60.98Zm.2529.1.A1_s_atBQ539485--1e+0At3g17240mtLPD2 (LIPOAMIDE DEHYDROGENASE 2)O.I.H.G.S.X.
0.7691.10.98Zm.2530.1.A1_atCF637153--7e-5At1g58350ZW18O.I.H.G.S.X.
0.7490.30.98Zm.5352.1.A1_atBU079827zinc finger, C3HC4 type family protein /// 3-isopropylmalate dehydrogenase 2-3e-53At5g142003-isopropylmalate dehydrogenase, chloroplast, putativeO.I.H.G.S.X.
0.6986.50.98Zm.9081.1.A1_atBM340497--4e-1At5g51510unknown proteinO.I.H.G.S.X.
0.6785.80.98Zm.16877.2.A1_a_atCK347759WOX13A protein-4e+0At5g13410immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family proteinO.I.H.G.S.X.
0.6481.70.98Zm.14028.3.A1_atBG841009hypothetical protein LOC100192735-8e-6At1g50490UBC20 (ubiquitin-conjugating enzyme 20)O.I.H.G.S.X.
0.5875.10.98Zm.12396.1.S1_atAY106879.1hypothetical protein LOC100278085-5e+0At5g03030DNAJ heat shock N-terminal domain-containing proteinO.I.H.G.S.X.
0.5674.40.98Zm.6475.3.S1_atAI737301PHD finger protein-3e-18At2g02470AL6 (ALFIN-LIKE 6)O.I.H.G.S.X.
0.5674.40.99Zm.4048.1.S1_atAW091504ras-related protein ARA-4-5e-35At2g43130ARA4O.I.H.G.S.X.
0.5369.10.98Zm.253.1.A1_atCF020390hypothetical protein LOC100279053-5e+0At5g29807unknown proteinO.I.H.G.S.X.
0.5267.30.98Zm.14470.1.S1_atCA400454--8e-28At3g62560GTP-binding protein, putativeO.I.H.G.S.X.
0.4658.40.98Zm.8709.1.A1_atCF624906--6e-6At1g01650aspartic-type endopeptidase/ peptidaseO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.195.9GSM320461protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.194.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.094.0GSM202319Mo17 19 day after pollination embryo tissue, biological replicate 3GSE8179Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Embryo dataLink to GEO
3.094.0GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.094.0GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.993.8GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.993.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.893.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.793.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.692.9GSM206310Lower pulvinus 60 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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