Co-expression analysis

Gene ID	Zm.16830.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At5g66390: peroxidase 72 (PER72) (P72) (PRXR8) (HF=3e-3)
Module size	6 genes
NF	0.05
%ile	2.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.40	48.5	0.95	Zm.16830.1.A1_at	CF626857	-	-	3e-3	At5g66390	peroxidase 72 (PER72) (P72) (PRXR8)	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.96	Zm.1831.1.S1_at	BG840713	-	-	1e-1	At4g21760	BGLU47 (Beta-glucosidase 47)	O.I.	H.G.	S.X.	Please select
0.21	15.5	0.95	Zm.1327.1.A1_at	BE643637	hypothetical protein LOC100273057	-	5e+0	At5g24860	FPF1 (FLOWERING PROMOTING FACTOR 1)	O.I.	H.G.	S.X.	Please select
0.06	2.3	0.95	Zm.9841.1.A1_at	BM340753	-	-	6e-3	At2g01340	unknown protein	O.I.	H.G.	S.X.	Please select
0.04	1.5	0.95	Zm.5650.1.S1_at	CF631308	polyadenylate-binding protein 2	-	9e-5	At2g23350	PAB4 (POLY(A) BINDING PROTEIN 4)	O.I.	H.G.	S.X.	Please select
0.02	0.7	0.96	Zm.17368.1.S1_at	CK371524	-	-	9e-1	At3g30260	AGL79 (AGAMOUS-LIKE 79)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
30.6	99.8	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
30.6	99.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
28.2	99.7	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.0	99.2	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.1	98.9	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.5	98.9	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.4	98.4	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.7	98.1	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.9	97.9	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.4	97.0	GSM320464	protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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