Co-expression analysis

Gene ID	Zm.16810.1.A1_at
Gene name	T-complex protein 1 subunit gamma
Homology with Arabidopsis	Similar to At5g26360: chaperonin, putative (HF=3e-32)
Module size	21 genes
NF	0.27
%ile	23.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.89	96.8	0.95	Zm.16810.1.A1_at	CF053948	T-complex protein 1 subunit gamma	-	3e-32	At5g26360	chaperonin, putative	O.I.	H.G.	S.X.	Please select
0.47	59.9	0.97	Zm.6938.1.A1_at	CO522151	hypothetical protein LOC100276436	-	4e+0	At3g58850	PAR2 (PHY RAPIDLY REGULATED 2)	O.I.	H.G.	S.X.	Please select
0.43	52.8	0.97	Zm.4903.1.S1_at	AI782917	hypothetical protein LOC100273473	-	1e+0	At3g26085	CAAX amino terminal protease family protein	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.96	Zm.14547.1.S1_at	BG840169	-	-	2e+0	At1g01380	ETC1 (ENHANCER OF TRY AND CPC 1)	O.I.	H.G.	S.X.	Please select
0.34	37.2	0.97	Zm.5994.1.A1_at	CF056325	ribonucleoprotein	-	2e-10	At4g24770	RBP31 (31-KDA RNA BINDING PROTEIN)	O.I.	H.G.	S.X.	Please select
0.34	37.2	0.96	Zm.3892.8.S1_at	CA404367	Elongation factor 1 alpha	-	0	At1g07920	elongation factor 1-alpha / EF-1-alpha	O.I.	H.G.	S.X.	Please select
0.34	37.2	0.96	Zm.7117.1.A1_a_at	AY104703.1	hypothetical protein LOC100273279 /// remorin	-	5e+0	At5g28630	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.97	Zm.13617.1.A1_at	CF028226	hypothetical protein LOC100192113	-	2e-10	At2g47590	PHR2 (photolyase/blue-light receptor 2)	O.I.	H.G.	S.X.	Please select
0.32	33.4	0.98	Zm.17647.1.A1_at	BM074201	-	-	2e+0	At4g23650	CDPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6)	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.97	Zm.347.1.S1_at	U82230.1	prolamin-box binding factor1	-	1e-5	At1g47655	Dof-type zinc finger domain-containing protein	O.I.	H.G.	S.X.	Please select
0.30	29.8	0.96	Zm.16481.1.A1_at	CD996342	-	-	5e+0	At5g59780	MYB59 (MYB DOMAIN PROTEIN 59)	O.I.	H.G.	S.X.	Please select
0.28	28.1	0.97	Zm.18450.1.A1_at	CD996768	-	-	1e-1	At3g18620	zinc finger (DHHC type) family protein	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.97	Zm.9617.1.A1_at	BM337585	-	-	5e+0	At4g26670	mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.97	Zm.7582.1.A1_at	BM073867	hypothetical protein LOC100216795	-	2e+0	At5g03440	unknown protein	O.I.	H.G.	S.X.	Please select
0.23	18.6	0.97	Zm.5293.1.A1_at	AI619137	hypothetical protein LOC100279147	-	5e-1	At3g55420	unknown protein	O.I.	H.G.	S.X.	Please select
0.21	15.5	0.96	Zm.16174.1.A1_at	AY107459.1	IDP155 protein	-	9e-2	At1g43970	unknown protein	O.I.	H.G.	S.X.	Please select
0.19	12.8	0.97	Zm.988.1.S1_at	CD433236	-	-	2e+0	At5g24510	60s acidic ribosomal protein P1, putative	O.I.	H.G.	S.X.	Please select
0.16	9.4	0.97	Zm.4040.1.A1_at	AI834032	-	-	5e+0	At1g53785	unknown protein	O.I.	H.G.	S.X.	Please select
0.14	7.7	0.97	Zm.12801.1.A1_at	CO524502	MON1	-	2e+0	At4g15053	unknown protein	O.I.	H.G.	S.X.	Please select
0.13	6.8	0.97	Zm.3095.1.S1_at	CO524214	hypothetical protein LOC100192080	-	4e-2	At5g17820	peroxidase 57 (PER57) (P57) (PRXR10)	O.I.	H.G.	S.X.	Please select
0.13	6.8	0.97	Zm.6973.1.S1_at	AY109828.1	hypothetical protein AY109828	-	5e-1	At4g28830	methyltransferase/ nucleic acid binding	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
11.6	98.6	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.2	98.4	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.1	98.4	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.9	98.3	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.9	98.3	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.3	98.2	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.3	98.2	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.0	98.2	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.2	98.0	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.8	93.5	GSM205421	B73 19 DAP endosperm tissue biological replicate 1	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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