Co-expression analysis

Gene ID	Zm.168.1.A1_at
Gene name	protein kinase1
Homology with Arabidopsis	Similar to At5g02290: NAK (HF=2e-5)
Module size	7 genes
NF	0.26
%ile	22.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	65.7	0.87	Zm.168.1.A1_at	X52384.1	protein kinase1	-	2e-5	At5g02290	NAK	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.88	Zm.3412.1.S1_at	CA405066	-	-	1e-8	At3g42950	glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein	O.I.	H.G.	S.X.	Please select
0.30	29.8	0.89	Zm.820.2.A1_x_at	BQ538933	hypothetical protein LOC100216625	-	4e+0	At1g17700	PRA1.F1 (PRENYLATED RAB ACCEPTOR 1.F1)	O.I.	H.G.	S.X.	Please select
0.25	21.3	0.90	Zm.4954.1.A1_at	AI586618	ischemia/reperfusion inducible protein	-	2e+0	At5g64400	-	O.I.	H.G.	S.X.	Please select
0.22	16.9	0.90	Zm.4950.1.A1_at	AW067244	receptor-like protein kinase	-	1e+1	At3g46390	unknown protein	O.I.	H.G.	S.X.	Please select
0.18	11.6	0.90	Zm.4952.1.A1_at	AI586613	-	-	2e-1	At5g59000	zinc finger (C3HC4-type RING finger) family protein	O.I.	H.G.	S.X.	Please select
0.09	4.0	0.91	Zm.6045.10.A1_a_at	AI714790	guanine nucleotide-binding protein beta subunit-like protein	-	1e-10	At1g18080	ATARCA	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.0	98.7	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.7	98.7	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.4	98.7	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.5	98.6	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.3	98.5	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.2	98.4	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.1	98.4	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.7	98.3	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.5	98.3	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.6	95.2	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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