Co-expression analysis

Gene ID Zm.16713.1.A1_at
Gene name hypothetical protein LOC100192650
Homology with ArabidopsisSimilar to At2g40590: 40S ribosomal protein S26 (RPS26B) (HF=3e+0)
Module size 6 genes
NF 0.33
%ile 32.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.7792.10.98Zm.16713.1.A1_atAY108582.1hypothetical protein LOC100192650-3e+0At2g4059040S ribosomal protein S26 (RPS26B)O.I.H.G.S.X.
0.5976.10.98Zm.3930.1.S1_s_atBQ538158AMP-binding protein-8e-37At3g05970LACS6 (long-chain acyl-CoA synthetase 6)O.I.H.G.S.X.
0.5571.60.98Zm.4869.1.S1_atCF637217hypothetical protein LOC100193077-4e-21At3g07050GTP-binding family proteinO.I.H.G.S.X.
0.4352.80.98Zm.4995.1.A1_atCA401993ETHYLENE-INSENSITIVE3-like 1 protein-1e-2At3g20770EIN3 (ETHYLENE-INSENSITIVE3)O.I.H.G.S.X.
0.169.40.98Zm.6828.1.A1_atAI396546--2e-1At1g02710glycine-rich proteinO.I.H.G.S.X.
0.104.60.98ZmAffx.165.1.S1_atAI668200--3e+0At3g28760-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.898.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.598.1GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.997.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.597.5GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.097.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.296.9GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.196.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.096.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.291.3GSM385709Deep-sowing 10d treatment TIBA, biological rep1GSE15371Auxin-induced gene expression in mesocotyl elongation of maize inbred line 3681-4 tolerant to deep-sowingLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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