Co-expression analysis

Gene ID	Zm.1666.1.S1_at
Gene name	Hypothetical protein LOC100191200
Homology with Arabidopsis	Similar to At3g04640: glycine-rich protein (HF=7e-1)
Module size	6 genes
NF	0.23
%ile	17.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	88.2	0.92	Zm.1666.1.S1_at	CF638202	Hypothetical protein LOC100191200	-	7e-1	At3g04640	glycine-rich protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.93	Zm.12829.1.A1_at	CA399668	permease I	-	2e-3	At5g49990	xanthine/uracil permease family protein	O.I.	H.G.	S.X.	Please select
0.23	18.6	0.92	Zm.8468.1.A1_at	BM074266	gibberellin receptor GID1L2	-	6e+0	At3g45480	zinc ion binding	O.I.	H.G.	S.X.	Please select
0.17	10.6	0.92	Zm.8142.1.A1_at	BM080424	hypothetical protein LOC100275043	-	4e-4	At1g05420	OFP12 (OVATE FAMILY PROTEIN 12)	O.I.	H.G.	S.X.	Please select
0.16	9.4	0.92	Zm.2619.1.A1_at	AW066551	-	-	7e-1	At3g04170	germin-like protein, putative	O.I.	H.G.	S.X.	Please select
0.11	5.3	0.92	Zm.4994.1.A1_at	CF039629	protein translation factor SUI1	-	6e-19	At5g54760	eukaryotic translation initiation factor SUI1, putative	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
14.6	98.9	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
14.4	98.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.3	98.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.1	98.6	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.5	98.6	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.4	98.5	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.9	98.5	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.8	98.3	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.4	98.3	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.9	97.3	GSM320464	protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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