Co-expression analysis

Gene ID Zm.16643.1.S1_at
Gene name peroxidase 27
Homology with ArabidopsisSimilar to At1g44970: peroxidase, putative (HF=3e-3)
Module size 6 genes
NF 0.07
%ile 3.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8395.60.97Zm.16643.1.S1_atCK144844peroxidase 27-3e-3At1g44970peroxidase, putativeO.I.H.G.S.X.
0.169.40.98Zm.13680.1.A1_atCB833804--4e-2At3g02160DNA bindingO.I.H.G.S.X.
0.158.60.98Zm.18220.1.S1_atCN845519hypothetical protein LOC100217249-2e-6At2g23780zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.083.40.98ZmAffx.764.1.A1_atAI746075hypothetical protein LOC100191363-3e+0At2g31215basic helix-loop-helix (bHLH) family proteinO.I.H.G.S.X.
0.041.50.98ZmAffx.755.1.S1_atAI745946--1e-27Atcg00800-O.I.H.G.S.X.
0.010.30.98Zm.16978.1.A1_atCF646243hypothetical protein LOC100275636-1e+0At4g10800-O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
16.699.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.199.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
16.099.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.698.9GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.398.8GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
13.398.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.198.6GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.998.3GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.097.3GSM320457protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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