Co-expression analysis

Gene ID	Zm.16594.2.S1_at
Gene name
Homology with Arabidopsis	Similar to At5g65620: peptidase M3 family protein / thimet oligopeptidase family protein (HF=4e-7)
Module size	6 genes
NF	0.84
%ile	98.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.99	Zm.16594.2.S1_at	CK371100	-	-	4e-7	At5g65620	peptidase M3 family protein / thimet oligopeptidase family protein	O.I.	H.G.	S.X.	Please select
0.83	95.6	0.98	Zm.17995.1.A1_at	CD999136	hypothetical protein LOC100276949	-	2e-13	At1g53450	unknown protein	O.I.	H.G.	S.X.	Please select
0.83	95.6	0.99	Zm.6048.1.S1_at	BE640401	serine/threonine protein kinase	-	7e-17	At2g24360	serine/threonine/tyrosine kinase, putative	O.I.	H.G.	S.X.	Please select
0.80	94.0	0.98	Zm.17992.1.A1_at	CK347312	-	-	2e-5	At5g36210	serine-type peptidase	O.I.	H.G.	S.X.	Please select
0.73	89.9	0.99	Zm.6048.2.S1_at	AI745933	-	-	6e-17	At2g24360	serine/threonine/tyrosine kinase, putative	O.I.	H.G.	S.X.	Please select
0.57	75.1	0.98	ZmAffx.1354.1.S1_at	40794996-157	-	-	3e+0	At4g07940	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
12.8	98.7	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.1	98.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.3	98.5	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.6	98.1	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.4	98.1	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.4	98.1	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.3	98.0	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.0	98.0	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.1	97.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.2	96.9	GSM202297	Mo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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