Co-expression analysis

Gene ID	Zm.16593.9.S1_x_at
Gene name	Hypothetical protein LOC100192949
Homology with Arabidopsis	Similar to At5g15520: 40S ribosomal protein S19 (RPS19B) (HF=1e-2)
Module size	6 genes
NF	0.46
%ile	56.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	89.9	0.97	Zm.16593.9.S1_x_at	AI657431	Hypothetical protein LOC100192949	-	1e-2	At5g15520	40S ribosomal protein S19 (RPS19B)	O.I.	H.G.	S.X.	Please select
0.61	79.5	0.97	Zm.12716.2.A1_at	AI833884	-	-	3e+0	At1g12630	DNA binding / transcription activator/ transcription factor	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.98	Zm.18119.1.A1_at	CN844952	-	-	9e-2	At5g41090	anac095 (Arabidopsis NAC domain containing protein 95)	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.98	Zm.5372.1.S1_at	AW000380	secondary cell wall-related glycosyltransferase family 8	-	5e-15	At3g18660	PGSIP1 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 1)	O.I.	H.G.	S.X.	Please select
0.36	41.3	0.97	Zm.4159.1.A1_at	CF007216	-	-	3e-16	At1g15130	hydroxyproline-rich glycoprotein family protein	O.I.	H.G.	S.X.	Please select
0.30	29.8	0.97	Zm.17271.8.A1_at	BM340602	40S ribosomal protein S10	-	3e-11	At5g52650	40S ribosomal protein S10 (RPS10C)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
10.1	98.4	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.9	98.3	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.2	98.2	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.7	98.1	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.5	98.1	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.3	98.0	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.9	97.9	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.3	97.8	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.3	97.8	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.1	90.8	GSM320457	protocol: Methylation filtration (MF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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