Co-expression analysis

Gene ID Zm.16593.1.A1_a_at
Gene name hypothetical protein LOC100192949
Homology with ArabidopsisSimilar to At5g61170: 40S ribosomal protein S19 (RPS19C) (HF=5e-20)
Module size 6 genes
NF 0.44
%ile 53.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.3844.20.88Zm.16593.1.A1_a_atCF629794hypothetical protein LOC100192949-5e-20At5g6117040S ribosomal protein S19 (RPS19C)O.I.H.G.S.X.
0.6077.80.90Zm.12865.1.A1_atCD959843hypothetical protein LOC100194037-2e+0At4g25780pathogenesis-related protein, putativeO.I.H.G.S.X.
0.5775.10.91Zm.16994.1.A1_atAI649902Methionine synthase-7e-163At5g17920ATMS1O.I.H.G.S.X.
0.3844.20.91Zm.13698.1.S1_atAY106691.1--2e-1At3g06460GNS1/SUR4 membrane family proteinO.I.H.G.S.X.
0.3336.00.91Zm.16304.1.A1_atCD43537460S ribosomal protein L12-1e-23At5g6067060S ribosomal protein L12 (RPL12C)O.I.H.G.S.X.
0.3233.40.89Zm.12888.1.A1_atAY106765.1hypothetical protein LOC100191869-9e-2At3g52280GTE6 (GENERAL TRANSCRIPTION FACTOR GROUP E6)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.398.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.698.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.498.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.798.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.198.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.497.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.197.7GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.097.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.090.2GSM320460protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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