Co-expression analysis

Gene ID	Zm.16505.1.A2_at
Gene name
Homology with Arabidopsis	Similar to At5g56030: HSP81-2 (HEAT SHOCK PROTEIN 81-2) (HF=0)
Module size	6 genes
NF	0.39
%ile	43.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.99	Zm.16505.1.A2_at	CF633865	-	-	0	At5g56030	HSP81-2 (HEAT SHOCK PROTEIN 81-2)	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.99	Zm.18993.1.S1_at	CO528827	-	-	3e-3	At2g10950	BSD domain-containing protein	O.I.	H.G.	S.X.	Please select
0.53	69.1	0.99	Zm.15863.1.A1_at	BM078830	-	-	6e-3	At5g49030	OVA2 (ovule abortion 2)	O.I.	H.G.	S.X.	Please select
0.50	65.7	1.00	Zm.13658.1.A1_at	AY107148.1	hypothetical protein LOC100193262	-	1e+0	At3g50350	unknown protein	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.99	Zm.2427.1.S1_at	AY108148.1	hypothetical protein LOC100217316	-	1e-3	At2g43970	La domain-containing protein	O.I.	H.G.	S.X.	Please select
0.15	8.6	0.99	Zm.17816.2.S1_a_at	CK144883	tRNA pseudouridine synthase family protein	-	2e-2	At1g76120	tRNA pseudouridine synthase family protein	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.4	98.1	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.9	97.9	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.9	96.7	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.8	96.6	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.2	96.0	GSM202290	Mo17 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
3.8	95.5	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.4	94.9	GSM162266	Wild type 2 with array type maize from Affymetrix	GSE7030	Phenotypic and molecular characterisation of a novel Bt2 allele in maize
2.9	93.8	GSM202303	Mo17 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.9	93.8	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.7	93.2	GSM202297	Mo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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