Co-expression analysis

Gene ID Zm.16504.2.A1_at
Gene name heat shock protein18c
Homology with ArabidopsisSimilar to At1g19910: AVA-P2 (HF=6e+0)
Module size 15 genes
NF 0.48
%ile 60.2

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9799.90.83Zm.16504.2.A1_atCD438012heat shock protein18c-6e+0At1g19910AVA-P2O.I.H.G.S.X.
0.7087.00.88ZmAffx.117.1.S1_atAI665629--8e+0At3g12835unknown proteinO.I.H.G.S.X.
0.6986.50.85ZmAffx.257.1.S1_atAI670300--8e-1At5g66090unknown proteinO.I.H.G.S.X.
0.5775.10.97RPTR-Zm-J01347-2_atRPTR-Zm-J01347-2---O.I.H.G.S.X.
0.5775.10.97RPTR-Zm-J01347-1_s_atRPTR-Zm-J01347-1---O.I.H.G.S.X.
0.5775.10.98RPTR-Zm-ECOLOXL_atRPTR-Zm-ECOLOXL---O.I.H.G.S.X.
0.5775.10.98RPTR-Zm-ECOLOXL_x_atRPTR-Zm-ECOLOXL---O.I.H.G.S.X.
0.5775.10.98RPTR-Zm-J01347-3_atRPTR-Zm-J01347-3---O.I.H.G.S.X.
0.5775.10.98RPTR-Zm-ECOLOXB_x_atRPTR-Zm-ECOLOXB---O.I.H.G.S.X.
0.5775.10.98RPTR-Zm-J01347-1_atRPTR-Zm-J01347-1---O.I.H.G.S.X.
0.3742.30.85ZmAffx.268.1.A1_atAI670396--1e+1At4g37450AGP18 (ARABINOGALACTAN PROTEIN 18)O.I.H.G.S.X.
0.3641.30.90ZmAffx.622.1.S1_atAI715050--1e+1At2g44370DC1 domain-containing proteinO.I.H.G.S.X.
0.2928.10.87ZmAffx.309.1.S1_atAI670442--1e+1At5g56150UBC30 (ubiquitin-conjugating enzyme 30)O.I.H.G.S.X.
0.2828.10.92ZmAffx.334.1.A1_atAI670520--1e+1At3g23440EDA6 (EMBRYO SAC DEVELOPMENT ARREST 6)O.I.H.G.S.X.
0.1710.60.91Zm.2165.1.A1_atBM072875hypothetical protein LOC100278701-6e+0At5g25390SHN2 (shine2)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
18.199.2GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
17.799.1GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
14.198.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.098.6GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
11.698.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.398.4GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.198.2GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.598.1GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.697.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.696.4GSM206332Lower pulvinus 15 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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