Co-expression analysis

Gene ID	Zm.1638.1.S1_at
Gene name	hypothetical protein LOC100192625
Homology with Arabidopsis	Similar to At4g27090: 60S ribosomal protein L14 (RPL14B) (HF=2e-15)
Module size	6 genes
NF	0.72
%ile	93.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.93	Zm.1638.1.S1_at	CF628096	hypothetical protein LOC100192625	-	2e-15	At4g27090	60S ribosomal protein L14 (RPL14B)	O.I.	H.G.	S.X.	Please select
0.80	94.0	0.96	Zm.12244.2.S1_at	AI668243	-	-	9e-1	At5g46940	invertase/pectin methylesterase inhibitor family protein	O.I.	H.G.	S.X.	Please select
0.61	79.5	0.95	Zm.1818.1.S1_a_at	BM073458	hypothetical protein LOC100194358	-	5e+0	At5g48545	histidine triad family protein / HIT family protein	O.I.	H.G.	S.X.	Please select
0.60	77.8	0.93	Zm.144.1.S1_x_at	U10696.1	metallothionein2	-	2e+1	At5g38344	transmembrane receptor	O.I.	H.G.	S.X.	Please select
0.55	71.6	0.96	Zm.2165.1.A1_at	BM072875	hypothetical protein LOC100278701	-	6e+0	At5g25390	SHN2 (shine2)	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.95	Zm.15807.1.A1_at	AY111212.1	-	-	1e+0	At4g19590	DNAJ heat shock N-terminal domain-containing protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
9.1	98.2	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.4	98.1	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.1	98.0	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.0	98.0	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.0	98.0	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.4	97.8	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.0	97.7	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.3	97.4	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.9	97.3	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.3	96.1	GSM205369	Mo17 13 DAP endosperm tissue biological replicate 2	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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