Co-expression analysis

Gene ID Zm.16268.1.A1_at
Gene name hypothetical protein LOC100272929
Homology with ArabidopsisSimilar to At2g45660: AGL20 (AGAMOUS-LIKE 20) (HF=1e+0)
Module size 6 genes
NF 0.30
%ile 28.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.97Zm.16268.1.A1_atCO526317hypothetical protein LOC100272929-1e+0At2g45660AGL20 (AGAMOUS-LIKE 20)O.I.H.G.S.X.
0.4759.90.96Zm.9774.1.A1_atBQ779271hypothetical protein LOC100276168-5e+0At2g41997LCR51 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 51)O.I.H.G.S.X.
0.4658.40.96Zm.9744.1.A1_atBM340629--6e+0At5g24316proline-rich family proteinO.I.H.G.S.X.
0.3641.30.98Zm.2937.1.A1_atAW091431--2e+0At3g13227serine-rich protein-relatedO.I.H.G.S.X.
0.2014.20.97Zm.18452.1.A1_atCO522494hypothetical protein LOC100194205-1e+0At5g47240atnudt8 (Arabidopsis thaliana Nudix hydrolase homolog 8)O.I.H.G.S.X.
0.115.30.97Zm.5480.1.A1_atAY103756.1glycine-rich RNA-binding protein 7-5e-1At2g46000unknown proteinO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
8.298.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.497.8GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.197.7GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.497.5GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.897.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.795.4GSM290555CCR mutant M1 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)Link to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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