Co-expression analysis

Gene ID Zm.16266.1.S1_at
Gene name
Homology with ArabidopsisSimilar to At4g24160: hydrolase, alpha/beta fold family protein (HF=2e+0)
Module size 20 genes
NF 0.30
%ile 28.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9599.60.92Zm.16266.1.S1_atCF243553--2e+0At4g24160hydrolase, alpha/beta fold family proteinO.I.H.G.S.X.
0.4861.30.94Zm.2418.1.S1_atBM379344VIP3 protein-1e-4At1g08780AIP3 (ABI3-INTERACTING PROTEIN 3)O.I.H.G.S.X.
0.3641.30.96Zm.18469.1.S1_atBM378527oxidoreductase-2e-7At4g13250short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.3437.20.97Zm.18485.1.S1_atAY104422.1DNA binding protein-4e-8At1g71260ATWHY2 (A. THALIANA WHIRLY 2)O.I.H.G.S.X.
0.3437.20.96Zm.13026.1.A1_a_atAY111398.1--3e-1At4g28930unknown proteinO.I.H.G.S.X.
0.3336.00.95Zm.18283.1.A1_atBG841297hypothetical protein LOC100217202 /// hypothetical protein LOC100217213-5e+0At5g49540unknown proteinO.I.H.G.S.X.
0.3029.80.96Zm.9565.1.A1_atBM381516beta-expansin 3-6e-1At4g19270unknown proteinO.I.H.G.S.X.
0.3029.80.96ZmAffx.51.1.A1_atAI665015Hypothetical protein LOC100217062-1e+1At5g54215-O.I.H.G.S.X.
0.2928.10.95Zm.15678.3.A1_x_atBM073330hypothetical protein LOC100193991 /// hypothetical protein LOC100273150 /// hypothetical protein LOC100277471-3e+0At5g16640pentatricopeptide (PPR) repeat-containing proteinO.I.H.G.S.X.
0.2622.70.97Zm.4335.3.A1_atAY109325.1--1e-3At2g24050MIF4G domain-containing protein / MA3 domain-containing proteinO.I.H.G.S.X.
0.2521.30.95Zm.2249.1.S1_atAY108383.1transcription factor Dp-1-1e-20At5g03415DPBO.I.H.G.S.X.
0.2419.80.98Zm.6644.2.A1_atAY109212.1--4e+0At5g42050-O.I.H.G.S.X.
0.2318.60.96Zm.19340.1.A1_atCO530664uracil phosphoribosyltransferase-1e+0At4g30180transcription factor/ transcription regulatorO.I.H.G.S.X.
0.2216.90.96Zm.6243.1.S1_atAI677547--7e-2At5g22460esterase/lipase/thioesterase family proteinO.I.H.G.S.X.
0.2216.90.96Zm.1129.1.A1_atBE510577--1e+0At1g80730ZFP1 (ZINC-FINGER PROTEIN 1)O.I.H.G.S.X.
0.2115.50.98Zm.15852.2.A1_atAY108720.1--1e-41At5g03430phosphoadenosine phosphosulfate (PAPS) reductase family proteinO.I.H.G.S.X.
0.2014.20.97Zm.2953.1.S1_atCF054623hypothetical protein LOC100276099-3e-6At5g13500unknown proteinO.I.H.G.S.X.
0.169.40.96Zm.15485.1.S1_atCD446373--8e-1At5g22000RHF2A (RING-H2 GROUP F2A)O.I.H.G.S.X.
0.158.60.95Zm.13660.1.S1_atAY107143.1--6e-2At1g62480vacuolar calcium-binding protein-relatedO.I.H.G.S.X.
0.158.60.96Zm.17751.1.S1_atCK371154--1e+0At1g14210ribonuclease T2 family proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
11.298.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.898.3GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.398.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.098.0GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.297.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.597.5GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.497.0GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.793.2GSM205423B73xMo17 19 DAP endosperm tissue biological replicate 1GSE8278Non-additive and imprinted gene expression in hybrid maize endosperm_19DAPLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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