Co-expression analysis

Gene ID	Zm.16259.3.A1_x_at
Gene name	hypothetical protein LOC100273269
Homology with Arabidopsis	Similar to At3g20865: AGP40 (arabinogalactan-protein 40) (HF=2e+0)
Module size	6 genes
NF	0.48
%ile	61.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.50	65.7	0.96	Zm.16259.3.A1_x_at	AI395995	hypothetical protein LOC100273269	-	2e+0	At3g20865	AGP40 (arabinogalactan-protein 40)	O.I.	H.G.	S.X.	Please select
0.55	71.6	0.96	Zm.5054.1.A1_at	AI600551	polygalacturonase	-	3e+0	At1g61340	F-box family protein	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.97	Zm.2135.1.S1_at	CD436684	hypothetical protein LOC100217069	-	4e-26	At5g13850	NACA3 (NASCENT POLYPEPTIDE-ASSOCIATED COMPLEX SUBUNIT ALPHA-LIKE PROTEIN 3)	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.97	Zm.4355.1.A1_at	CK827466	seed maturation protein	-	2e+0	At5g10140	FLC (FLOWERING LOCUS C)	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.97	Zm.14384.1.A1_at	CK144440	hypothetical protein LOC100191907	-	1e-1	At3g25850	DC1 domain-containing protein	O.I.	H.G.	S.X.	Please select
0.25	21.3	0.96	Zm.6948.1.A1_at	AW288752	serine/threonine-protein phosphatase PP1	-	8e-12	At2g29400	TOPP1 (TYPE ONE PROTEIN PHOSPHATASE 1)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.9	97.3	GSM205420	Mo17 19 DAP endosperm tissue biological replicate 1	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
5.4	97.0	GSM205424	Mo17 19 DAP endosperm tissue biological replicate 2	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
5.0	96.7	GSM205431	Mo17 19 DAP endosperm tissue biological replicate 3	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
4.7	96.5	GSM202299	Mo17xB73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.5	96.3	GSM202298	B73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.4	96.2	GSM202307	B73xMo17 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.3	96.1	GSM205434	Mo17xB73 19 DAP endosperm tissue biological replicate 3	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
4.2	96.0	GSM202292	B73 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.2	96.0	GSM202306	Mo17xB73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.2	96.0	GSM205422	Mo17xB73 19 DAP endosperm tissue biological replicate 1	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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