Co-expression analysis

Gene ID	Zm.16259.3.A1_a_at
Gene name	hypothetical protein LOC100273269
Homology with Arabidopsis	Similar to At3g20865: AGP40 (arabinogalactan-protein 40) (HF=2e+0)
Module size	6 genes
NF	0.63
%ile	84.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.91	99.0	0.96	Zm.16259.3.A1_a_at	AI395995	hypothetical protein LOC100273269	-	2e+0	At3g20865	AGP40 (arabinogalactan-protein 40)	O.I.	H.G.	S.X.	Please select
0.80	94.0	0.98	Zm.6612.1.S1_at	AI444726	hypothetical protein LOC100279969	-	2e-1	At1g64380	AP2 domain-containing transcription factor, putative	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.98	ZmAffx.1325.1.S1_at	40794996-35	-	-	4e-2	At1g49910	WD-40 repeat family protein / mitotic checkpoint protein, putative	O.I.	H.G.	S.X.	Please select
0.61	79.5	0.97	ZmAffx.1326.1.S1_at	40794996-148	-	-	0	Atmg00570	-	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.96	ZmAffx.535.1.A1_at	AI711782	-	-	2e-1	At1g23270	unknown protein	O.I.	H.G.	S.X.	Please select
0.35	38.9	0.96	ZmAffx.144.1.S1_at	AI667795	-	-	8e-1	At3g57390	AGL18	O.I.	H.G.	S.X.	Please select

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Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.6	97.1	GSM205420	Mo17 19 DAP endosperm tissue biological replicate 1	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
5.1	96.8	GSM205424	Mo17 19 DAP endosperm tissue biological replicate 2	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
4.9	96.7	GSM202299	Mo17xB73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.7	96.5	GSM202298	B73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.7	96.5	GSM205431	Mo17 19 DAP endosperm tissue biological replicate 3	GSE8278	Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP
4.6	96.4	GSM202307	B73xMo17 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.4	96.2	GSM202292	B73 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.3	96.1	GSM202306	Mo17xB73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.2	96.0	GSM202295	Mo17xB73 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
4.2	96.0	GSM202302	B73xMo17 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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