| Gene ID | Zm.16259.1.A1_x_at |
| Gene name | hypothetical protein LOC100273269 |
| Homology with Arabidopsis | Similar to At4g27230: HTA2 (histone H2A) (HF=1e-6) |
| Module size | 6 genes |
| NF | 0.33 |
| %ile | 32.0 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.77 | 92.1 | 0.99 | Zm.16259.1.A1_x_at | BQ539455 | hypothetical protein LOC100273269 | - | 1e-6 | At4g27230 | HTA2 (histone H2A) | O.I. | H.G. | S.X. | |
| 0.47 | 59.9 | 0.99 | Zm.6113.1.A1_at | CF630251 | - | - | 7e-2 | At4g22745 | MBD1 | O.I. | H.G. | S.X. | |
| 0.36 | 41.3 | 0.99 | Zm.10656.1.A1_at | BQ538423 | hypothetical protein LOC100216802 | - | 3e+0 | At4g25570 | ACYB-2 | O.I. | H.G. | S.X. | |
| 0.28 | 28.1 | 0.99 | Zm.2979.1.S1_at | BG841486 | trafficking protein particle complex protein 2 | - | 2e-12 | At1g80500 | - | O.I. | H.G. | S.X. | |
| 0.26 | 22.7 | 0.99 | Zm.6787.1.A1_a_at | AF277454.1 | hypothetical protein LOC100274407 /// UMP synthase | - | 2e-17 | At3g54470 | uridine 5'-monophosphate synthase / UMP synthase (PYRE-F) (UMPS) | O.I. | H.G. | S.X. | |
| 0.20 | 14.2 | 0.98 | Zm.13232.1.S1_at | CA452744 | tyrosine/DOPA decarboxylase 2 | - | 9e-1 | At2g04630 | NRPB6B | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 9.2 | 98.2 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.4 | 97.8 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 6.8 | 97.6 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 6.3 | 97.4 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 6.1 | 97.4 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 6.0 | 97.3 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.5 | 97.1 | GSM205420 | Mo17 19 DAP endosperm tissue biological replicate 1 | GSE8278 | Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP | |
| 5.4 | 97.0 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.0 | 96.7 | GSM205424 | Mo17 19 DAP endosperm tissue biological replicate 2 | GSE8278 | Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP | |
| 4.6 | 96.4 | GSM205431 | Mo17 19 DAP endosperm tissue biological replicate 3 | GSE8278 | Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.59 | 78.0 | Os03g0279200 | At4g27230 | - | Histone H2A | 1e-7 | At5g02560 | HTA12 | O.I. | H.G. | S.X. | |
| 0.50 | 68.0 | Os02g0120800 | At4g27230 | - | Rop2 small GTP binding protein (Putative ROPfamily GTPase ROP2) | 2e-52 | At1g20090 | ROP2 (RHO-RELATED PROTEIN FROM PLANTS 2) | O.I. | H.G. | S.X. | |
| 0.44 | 58.1 | Os01g0282800 | At4g27230 | - | Beta tubulin (Fragment) | 3e-6 | At5g12250 | TUB6 (BETA-6 TUBULIN) | O.I. | H.G. | S.X. | |
| 0.31 | 34.5 | Os07g0637400 | At4g27230 | - | Novel plant SNARE 12 (AtNPSN12) | 7e-13 | At1g48240 | ATNPSN12 | O.I. | H.G. | S.X. | |
| 0.29 | 31.1 | Os03g0327600 | At4g27230 | - | Ricin B-related lectin domain containing protein | 1e-2 | At2g39050 | hydroxyproline-rich glycoprotein family protein | O.I. | H.G. | S.X. | |
| 0.17 | 12.6 | Os02g0167300 | At4g27230 | - | Tubulin beta-3 chain (Beta-3 tubulin) | 3e-179 | At5g62700 | TUB3 | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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