Co-expression analysis

Gene ID	Zm.16227.1.A1_at
Gene name	hypothetical protein LOC100273421
Homology with Arabidopsis	Similar to At1g14520: MIOX1 (MYO-INISITOL OXYGENASE) (HF=2e-10)
Module size	6 genes
NF	0.25
%ile	20.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.71	88.2	0.96	Zm.16227.1.A1_at	BI180294	hypothetical protein LOC100273421	-	2e-10	At1g14520	MIOX1 (MYO-INISITOL OXYGENASE)	O.I.	H.G.	S.X.	Please select
0.25	21.3	0.96	Zm.1937.1.S1_at	CN845484	hypothetical protein LOC100277662	-	5e+0	At3g50800	unknown protein	O.I.	H.G.	S.X.	Please select
0.25	21.3	0.96	Zm.4338.1.A1_at	CF638243	peroxidase 72	-	1e-8	At5g66390	peroxidase 72 (PER72) (P72) (PRXR8)	O.I.	H.G.	S.X.	Please select
0.20	14.2	0.96	Zm.13217.1.A1_at	AI065901	hypothetical protein LOC100273064	-	1e+0	At1g31500	endonuclease/exonuclease/phosphatase family protein	O.I.	H.G.	S.X.	Please select
0.15	8.6	0.96	Zm.4747.1.S1_a_at	AY105845.1	small nuclear ribonucleoprotein-associated protein B	-	3e-9	At5g44500	small nuclear ribonucleoprotein associated protein B, putative / snRNP-B, putative / Sm protein B, putative	O.I.	H.G.	S.X.	Please select
0.13	6.8	0.96	Zm.18526.1.S1_at	CO522434	hypothetical protein LOC100272796	-	6e-17	At5g13100	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.2	97.8	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.8	97.2	GSM320444	protocol: mRNA - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.3	96.9	GSM320445	protocol: mRNA - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.7	96.5	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.7	96.5	GSM253249	ZM_12h_SG200_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
4.6	96.4	GSM323172	Zm_SG200Dpep1_24hpi_III	GSE12892	Maize gene expression during infection with Ustilago maydis strain SG200Dpep1
4.1	95.9	GSM253277	ZM_8d_SG200_3inf_I	GSE10023	Maize gene expression during infection with Ustilago maydis
4.1	95.9	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.8	95.5	GSM253246	ZM_12h_Mock_3inf_III	GSE10023	Maize gene expression during infection with Ustilago maydis
3.7	95.4	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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