Co-expression analysis

Gene ID	Zm.162.1.A1_x_at
Gene name	17.5 kDa class II heat shock protein /// cell wall protein (AA 1-267)
Homology with Arabidopsis	Similar to At5g66370: unknown protein (HF=8e-1)
Module size	18 genes
NF	0.74
%ile	94.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.68	86.1	0.88	Zm.162.1.A1_x_at	M36912.1	17.5 kDa class II heat shock protein /// cell wall protein (AA 1-267)	-	8e-1	At5g66370	unknown protein	O.I.	H.G.	S.X.	Please select
0.90	97.0	0.91	Zm.17307.1.S1_at	CK367910	-	-	4e+0	At2g30370	allergen-related	O.I.	H.G.	S.X.	Please select
0.88	96.7	0.90	Zm.15688.1.S1_at	CF630538	-	-	5e-1	At4g27330	SPL (SPOROCYTELESS)	O.I.	H.G.	S.X.	Please select
0.88	96.7	0.93	Zm.3357.1.A1_at	BM347858	hypothetical protein LOC100273400	-	1e+0	At4g11020	unknown protein	O.I.	H.G.	S.X.	Please select
0.86	96.3	0.90	Zm.17306.1.A1_at	CK348204	-	-	6e+0	At5g26890	unknown protein	O.I.	H.G.	S.X.	Please select
0.86	96.3	0.94	Zm.3358.2.A1_at	AY105740.1	-	-	7e+0	At2g44420	protein N-terminal asparagine amidohydrolase family protein	O.I.	H.G.	S.X.	Please select
0.81	94.3	0.96	Zm.3545.1.A1_at	BM267030	translation initiation factor 5A	-	4e-20	At1g69410	ELF5A-3 (EUKARYOTIC ELONGATION FACTOR 5A-3)	O.I.	H.G.	S.X.	Please select
0.81	94.3	0.91	Zm.13002.1.S1_at	CF041204	-	-	1e-10	At4g27230	HTA2 (histone H2A)	O.I.	H.G.	S.X.	Please select
0.76	91.1	0.95	Zm.13401.1.A1_at	AF457954.1	-	-	4e-19	At1g48850	EMB1144 (embryo defective 1144)	O.I.	H.G.	S.X.	Please select
0.71	88.2	0.94	Zm.7414.1.A1_at	BM078319	-	-	5e+0	At1g63830	proline-rich family protein	O.I.	H.G.	S.X.	Please select
0.71	88.2	0.95	Zm.13401.1.S1_at	AF457954.1	-	-	4e-19	At1g48850	EMB1144 (embryo defective 1144)	O.I.	H.G.	S.X.	Please select
0.68	86.1	0.94	Zm.15540.1.S1_at	CD219351	hypothetical protein LOC100277347	-	1e-2	At1g27390	TOM20-2 (TRANSLOCASE OUTER MEMBRANE 20-2)	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.95	Zm.2566.1.S1_at	BM079352	-	-	6e-7	At5g56950	NAP1	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.96	Zm.2565.1.S1_at	AY112147.1	protein binding protein	-	2e+0	At4g28050	TET7 (TETRASPANIN7)	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.97	Zm.3358.1.A1_at	AI947857	-	-	7e+0	At4g02970	AT7SL-1 (Arabidopsis 7SL RNA 1)	O.I.	H.G.	S.X.	Please select
0.59	76.1	0.95	Zm.6291.1.A1_at	BM335257	hypothetical protein LOC100278771	-	2e-5	At2g34920	EDA18 (embryo sac development arrest 18)	O.I.	H.G.	S.X.	Please select
0.54	69.8	0.92	Zm.1039.3.A1_x_at	AI677375	Hypothetical protein LOC100194359	-	3e+0	At4g18580	unknown protein	O.I.	H.G.	S.X.	Please select
0.41	49.7	0.94	Zm.12209.1.S1_at	CO524348	hypothetical protein LOC100279875	-	2e-5	At4g36195	serine carboxypeptidase S28 family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
7.6	97.9	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.5	97.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.3	97.8	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.1	97.7	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.1	97.7	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.0	97.7	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.8	97.6	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.0	97.3	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.9	97.3	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.5	95.1	GSM206310	Lower pulvinus 60 min polysomal RNA biorep 1	GSE8320	Transcriptional and translational gene regulation in the maize pulvinus

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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