| Gene ID | Zm.16049.1.S1_at |
| Gene name | 40S ribosomal protein S28 |
| Homology with Arabidopsis | Similar to At5g03850: 40S ribosomal protein S28 (RPS28B) (HF=8e-5) |
| Module size | 7 genes |
| NF | 0.43 |
| %ile | 49.9 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.67 | 85.8 | 0.99 | Zm.16049.1.S1_at | BM888637 | 40S ribosomal protein S28 | - | 8e-5 | At5g03850 | 40S ribosomal protein S28 (RPS28B) | O.I. | H.G. | S.X. | |
| 0.67 | 85.8 | 0.99 | Zm.6894.1.A1_at | BM380620 | - | - | 7e-47 | At1g69830 | AMY3 (ALPHA-AMYLASE-LIKE 3) | O.I. | H.G. | S.X. | |
| 0.63 | 81.1 | 0.99 | Zm.6195.1.A1_x_at | AI668513 | hypothetical protein LOC100275106 | - | 4e+0 | At4g17790 | - | O.I. | H.G. | S.X. | |
| 0.33 | 36.0 | 0.99 | Zm.17513.1.A1_at | BM074532 | MFP1 attachment factor 1 | - | 5e+0 | At1g22840 | CYTC-1 (CYTOCHROME C-1) | O.I. | H.G. | S.X. | |
| 0.29 | 28.1 | 0.99 | Zm.5825.1.A1_at | AI649790 | hypothetical protein LOC100279429 | - | 1e-2 | At1g10390 | nucleoporin family protein | O.I. | H.G. | S.X. | |
| 0.28 | 28.1 | 0.99 | Zm.1693.1.A1_at | BM382165 | - | - | 4e-3 | At3g55670 | - | O.I. | H.G. | S.X. | |
| 0.20 | 14.2 | 0.99 | ZmAffx.485.1.A1_at | AI691349 | - | - | 8e-1 | Atmg00140 | - | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 7.2 | 97.8 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.2 | 97.8 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 6.8 | 97.6 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 5.2 | 96.9 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.9 | 96.7 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 4.0 | 95.8 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 2.7 | 93.2 | GSM205436 | B73xMo17 19 DAP endosperm tissue biological replicate 3 | GSE8278 | Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP | |
| 2.4 | 92.2 | GSM205429 | B73xMo17 19 DAP endosperm tissue biological replicate 2 | GSE8278 | Non-additive and imprinted gene expression in hybrid maize endosperm_19DAP | |
| 2.4 | 92.2 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 2.4 | 92.2 | GSM253280 | ZM_8d_SG200_3Alu_I | GSE10023 | Maize gene expression during infection with Ustilago maydis | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.71 | 87.8 | GmaAffx.60550.2.S1_at | At5g03850 | - | - | 1e-12 | At3g10090 | 40S ribosomal protein S28 (RPS28A) | O.I. | H.G. | S.X. | |
| 0.83 | 92.5 | GmaAffx.92731.1.S1_at | At5g03850 | - | - | 4e-46 | At1g07770 | RPS15A (ribosomal protein s15a) | O.I. | H.G. | S.X. | |
| 0.77 | 90.3 | GmaAffx.92746.1.S1_at | At5g03850 | - | - | 1e-4 | At3g53740 | 60S ribosomal protein L36 (RPL36B) | O.I. | H.G. | S.X. | |
| 0.67 | 86.1 | GmaAffx.92482.1.S1_at | At5g03850 | - | - | 2e-39 | At2g44120 | 60S ribosomal protein L7 (RPL7C) | O.I. | H.G. | S.X. | |
| 0.60 | 80.7 | GmaAffx.91522.1.S1_at | At5g03850 | Ribosomal protein S6 (RPS6) | - | 9e-23 | At5g10360 | EMB3010 (embryo defective 3010) | O.I. | H.G. | S.X. | |
| 0.53 | 74.2 | GmaAffx.93431.1.S1_at | At5g03850 | - | - | 1e-31 | At2g18110 | elongation factor 1-beta, putative / EF-1-beta, putative | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Hordeum_vulgare |
| Oryza_sativa |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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