Co-expression analysis

Gene ID Zm.15894.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At4g27230: HTA2 (histone H2A) (HF=3e-14)
Module size 6 genes
NF 0.37
%ile 40.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5674.40.95Zm.15894.1.A1_atBG873874--3e-14At4g27230HTA2 (histone H2A)O.I.H.G.S.X.
0.6077.80.95Zm.5481.1.A1_atCO534121--7e-2At5g47455unknown proteinO.I.H.G.S.X.
0.5065.70.97Zm.13249.1.S1_a_atX98496.1embryo surrounding region1 /// ESR1c1 protein-7e-2At1g29380-O.I.H.G.S.X.
0.3131.60.96Zm.5565.1.S1_atD45402.1cysteine protease1-9e-11At4g39090RD19 (RESPONSIVE TO DEHYDRATION 19)O.I.H.G.S.X.
0.2724.60.95Zm.12021.1.A1_atBM382722hypothetical protein LOC100273474-4e+0At5g10140FLC (FLOWERING LOCUS C)O.I.H.G.S.X.
0.1912.80.96Zm.6142.1.A1_atAY105151.1annexin p33-2e-1At5g10220ANN6 (ANNEXIN ARABIDOPSIS 6)O.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
4.596.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.795.4GSM253279ZM_8d_SG200_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
3.494.9GSM202306Mo17xB73 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
3.394.7GSM202299Mo17xB73 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
3.294.5GSM202296B73xMo17 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
3.194.3GSM202302B73xMo17 immature ear tissue, biological replicate 2GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
3.194.3GSM202307B73xMo17 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
3.194.3GSM202292B73 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
3.094.0GSM202295Mo17xB73 immature ear tissue, biological replicate 1GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO
2.893.5GSM202304B73 immature ear tissue, biological replicate 3GSE8176Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear dataLink to GEO

Inter-species module comparison

A co-expression module including the Arabidopsis gene, At4g27230, orthologous to the query gene, Zm.15894.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.O.I.H.G.S.X.Other DB
0.3235.7At4g27230828831HTA2 (histone H2A)Encodes HTA2, a histone H2A protein.O.I.H.G.S.X.
0.5773.8At1g07790837293HTB1Encodes a histone 2B (H2B) protein.O.I.H.G.S.X.
0.5773.8At3g20670821614HTA13Encodes HTA13, a histone H2A protein.O.I.H.G.S.X.
0.5065.3At5g59690836090histone H4F:DNA binding;P:nucleosome assembly;C:thylakoid;MOPFVO.I.H.G.S.X.
0.3338.1At1g51060841528HTA10Encodes HTA10, a histone H2A protein.O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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