Co-expression analysis

Gene ID	Zm.15826.1.A1_at
Gene name	Histone H4
Homology with Arabidopsis	Similar to At5g59690: histone H4 (HF=2e-31)
Module size	6 genes
NF	0.69
%ile	90.9

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.83	95.6	0.97	Zm.15826.1.A1_at	CF602424	Histone H4	-	2e-31	At5g59690	histone H4	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.97	Zm.7038.1.A1_at	AY107850.1	hypothetical protein LOC100192898	-	1e+0	At5g24170	-	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.97	Zm.13741.1.A1_at	CK828166	hypothetical protein LOC100192567	-	3e-2	At3g02790	zinc finger (C2H2 type) family protein	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.98	Zm.5415.1.A1_at	BM074945	-	-	5e-1	At3g22210	unknown protein	O.I.	H.G.	S.X.	Please select
0.60	77.8	0.97	Zm.3232.1.A1_at	AW171810	-	-	1e-7	At1g18160	protein kinase family protein	O.I.	H.G.	S.X.	Please select
0.33	36.0	0.98	Zm.8095.2.S1_at	AI665130	Hypothetical protein LOC100216820	-	2e-2	At5g63640	VHS domain-containing protein / GAT domain-containing protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
5.6	97.1	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.1	95.9	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.1	95.9	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.6	95.2	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.8	93.5	GSM202299	Mo17xB73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.8	93.5	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.8	93.5	GSM202306	Mo17xB73 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.7	93.2	GSM202296	B73xMo17 immature ear tissue, biological replicate 1	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.7	93.2	GSM202307	B73xMo17 immature ear tissue, biological replicate 3	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data
2.7	93.2	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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