Co-expression analysis

Gene ID Zm.15818.1.S1_at
Gene name ferredoxin5
Homology with ArabidopsisSimilar to At1g10960: ATFD1 (FERREDOXIN 1) (HF=8e-2)
Module size 6 genes
NF 0.46
%ile 56.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.97Zm.15818.1.S1_atM73828.1ferredoxin5-8e-2At1g10960ATFD1 (FERREDOXIN 1)O.I.H.G.S.X.
0.5571.60.97Zm.13265.1.S1_atAY110086.1--1e-3At1g12240ATBETAFRUCT4O.I.H.G.S.X.
0.4048.50.97Zm.10793.1.A1_atCF635868--5e-9At4g04770ATABC1 (ATP BINDING CASSETTE PROTEIN 1)O.I.H.G.S.X.
0.3538.90.97Zm.5646.2.A1_x_atAW257823hypothetical protein LOC100191650-3e-41At1g04750VAMP721 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 721)O.I.H.G.S.X.
0.3336.00.97Zm.17181.1.S1_atCK145306--7e-17At1g64660ATMGL (ARABIDOPSIS THALIANA METHIONINE GAMMA-LYASE)O.I.H.G.S.X.
0.3131.60.97Zm.8729.1.A1_atBM339706hypothetical protein LOC100277693-2e-2At3g42310unknown proteinO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.396.9GSM290555CCR mutant M1 with array type maize from AffymetrixGSE11531Downregulation of cinnamoyl-coenzyme A reductase in maize (affy_ccr_maize)Link to GEO
5.296.9GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
5.196.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.996.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.896.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.896.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.796.5GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.396.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.396.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.095.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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