Co-expression analysis

Gene ID	Zm.15800.5.A1_x_at
Gene name
Homology with Arabidopsis	Similar to At4g13780: methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative (HF=1e-5)
Module size	7 genes
NF	0.71
%ile	92.3

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.55	71.6	0.98	Zm.15800.5.A1_x_at	CA404204	-	-	1e-5	At4g13780	methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative	O.I.	H.G.	S.X.	Please select
0.86	96.3	0.98	Zm.6054.1.A1_at	AW497492	-	-	3e+0	At5g25490	zinc finger (Ran-binding) family protein	O.I.	H.G.	S.X.	Please select
0.73	89.9	0.98	Zm.14489.1.S1_at	BQ527929	MFS18 protein	-	1e+0	At5g67510	60S ribosomal protein L26 (RPL26B)	O.I.	H.G.	S.X.	Please select
0.71	88.2	0.98	Zm.4369.2.S1_at	CF016250	-	-	5e+0	At2g37590	Dof-type zinc finger domain-containing protein	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.98	Zm.14400.1.S1_at	AW000473	hypothetical protein LOC100191706	-	8e-52	At4g02720	unknown protein	O.I.	H.G.	S.X.	Please select
0.55	71.6	0.98	Zm.4371.1.A1_at	BG517913	hypothetical protein LOC100217272	-	3e-1	At5g22240	OFP10	O.I.	H.G.	S.X.	Please select
0.50	65.7	0.98	Zm.5517.1.A1_at	BE051194	hypothetical protein LOC100273563	-	2e-1	At1g15740	leucine-rich repeat family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
4.5	96.3	GSM258535	Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 3	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
3.8	95.5	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.6	95.2	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.6	95.2	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.4	94.9	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.3	94.7	GSM253260	ZM_2d_SG200_3inf_II	GSE10023	Maize gene expression during infection with Ustilago maydis
3.3	94.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.3	94.7	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.0	94.0	GSM258537	Wild-type siblings in family segregating for T5-6b DpDf plants; Biological replicate 4	GSE10243	Profiling expression changes caused by a segmental aneuploid in maize
3.0	94.0	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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