Co-expression analysis

Gene ID Zm.15793.1.A1_at
Gene name hypothetical protein LOC100273806
Homology with ArabidopsisSimilar to At1g48570: zinc finger (Ran-binding) family protein (HF=9e-2)
Module size 6 genes
NF 0.12
%ile 7.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.4455.70.88Zm.15793.1.A1_atCA403746hypothetical protein LOC100273806-9e-2At1g48570zinc finger (Ran-binding) family proteinO.I.H.G.S.X.
0.5065.70.91Zm.793.1.A1_atBM416836hypothetical protein LOC100280321-4e-27At2g43750OASB (O-ACETYLSERINE (THIOL) LYASE B)O.I.H.G.S.X.
0.4048.50.93Zm.7635.1.A1_atAW433467hypothetical protein LOC100272963-3e-15At5g58070TIL (TEMPERATURE-INDUCED LIPOCALIN)O.I.H.G.S.X.
0.2622.70.92Zm.10111.1.A1_atBM380307hypothetical protein LOC100217307-9e+0At4g30180transcription factor/ transcription regulatorO.I.H.G.S.X.
0.072.90.92Zm.14951.1.S1_a_atM36914.1cell wall protein (put.); putative-5e-3At2g30370allergen-relatedO.I.H.G.S.X.
0.031.10.90Zm.359.1.S1_atU82481.1kinase interacting kinase1-2e-6At3g16030CES101 (CALLUS EXPRESSION OF RBCS 101)O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
13.198.7GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.598.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
12.298.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.896.6GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.296.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.095.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.995.7GSM206304Upper pulvinus 60 min polysomal RNA biorep 1GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
3.695.2GSM206328Upper pulvinus 60 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
3.595.1GSM206325Upper pulvinus 5 min polysomal RNA biorep 2GSE8320Transcriptional and translational gene regulation in the maize pulvinusLink to GEO
3.494.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the poplar gene, PtpAffx.44202.1.A1_at, orthologous to the query gene, Zm.15793.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.7895.1PtpAffx.44202.1.A1_atAt1g48570--2e-2At5g46780VQ motif-containing proteinO.I.H.G.S.X.
0.6891.3PtpAffx.225099.1.S1_atAt1g48570hypothetical protein-3e-109At4g30020subtilase family proteinO.I.H.G.S.X.
0.6388.1PtpAffx.205154.1.S1_atAt1g48570hypothetical protein-2e-1At2g01870unknown proteinO.I.H.G.S.X.
0.6287.2PtpAffx.206099.1.S1_atAt1g48570hypothetical protein-8e-3At3g57240BG3 (BETA-1,3-GLUCANASE 3)O.I.H.G.S.X.
0.5984.9PtpAffx.203765.1.S1_atAt1g48570hypothetical protein-8e-1At4g28680tyrosine decarboxylase, putativeO.I.H.G.S.X.
0.5380.5PtpAffx.145936.1.S1_atAt1g48570--5e+0At5g48190unknown proteinO.I.H.G.S.X.
0.5279.4PtpAffx.20815.1.S1_atAt1g48570--3e-3At1g23740oxidoreductase, zinc-binding dehydrogenase family proteinO.I.H.G.S.X.
0.4875.4PtpAffx.134355.1.A1_atAt1g48570hypothetical protein-2e-2At3g49570LSU3 (RESPONSE TO LOW SULFUR 3)O.I.H.G.S.X.
0.4774.6PtpAffx.200015.1.S1_atAt1g48570cytochrome P450-8e-1At5g36130cytochrome P450 familyO.I.H.G.S.X.
0.4673.7PtpAffx.225604.1.S1_atAt1g48570tir-nbs-lrr resistance protein-7e-9At3g59780-O.I.H.G.S.X.
0.4673.7PtpAffx.204886.1.S1_atAt1g48570white-brown-complex ABC transporter family-5e-46At1g51500CER5 (ECERIFERUM 5)O.I.H.G.S.X.
0.4471.9PtpAffx.134527.1.A1_atAt1g48570hypothetical protein-1e-6At1g28110SCPL45 (SERINE CARBOXYPEPTIDASE-LIKE 45 PRECURSOR)O.I.H.G.S.X.
0.4167.7PtpAffx.50634.1.A1_s_atAt1g48570hypothetical protein-3e-1At2g27790nucleic acid binding / nucleotide bindingO.I.H.G.S.X.
0.4167.7PtpAffx.208263.1.S1_s_atAt1g48570hypothetical protein-5e-3At1g67730YBR159O.I.H.G.S.X.
0.3964.6PtpAffx.208642.1.S1_atAt1g48570hypothetical protein-1e-1At4g14660NRPE7O.I.H.G.S.X.
0.3762.3PtpAffx.40421.1.A1_s_atAt1g48570--4e-1At4g12860UNE14 (unfertilized embryo sac 14)O.I.H.G.S.X.
0.3661.6PtpAffx.249.169.A1_a_atAt1g48570hypothetical protein-1e+0At5g42030ABIL4 (ABL INTERACTOR-LIKE PROTEIN 4)O.I.H.G.S.X.
0.3458.3Ptp.5046.1.S1_atAt1g48570hypothetical protein-1e-46At1g74210glycerophosphoryl diester phosphodiesterase family proteinO.I.H.G.S.X.
0.3153.7PtpAffx.64399.1.S1_atAt1g48570bile acid:Na+ symporter family protein-2e-21At2g26900bile acid:sodium symporter family proteinO.I.H.G.S.X.
0.2950.5PtpAffx.37135.1.A1_atAt1g48570hypothetical protein-2e+0At5g51410LUC7 N_terminus domain-containing proteinO.I.H.G.S.X.
0.2950.5PtpAffx.225483.1.S1_atAt1g48570hypothetical protein-1e+0At5g27260unknown proteinO.I.H.G.S.X.
0.2645.2Ptp.1489.2.S1_s_atAt1g48570hypothetical protein-2e-2At3g60080zinc finger (C3HC4-type RING finger) family proteinO.I.H.G.S.X.
0.2340.5PtpAffx.136723.1.S1_s_atAt1g48570--3e-52At1g62180APR2 (5'ADENYLYLPHOSPHOSULFATE REDUCTASE 2)O.I.H.G.S.X.
0.2034.6PtpAffx.209589.1.S1_atAt1g48570hypothetical protein-7e-1At3g29170unknown proteinO.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Triticum_aestivum
Vitis_vinifera



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