Co-expression analysis

Gene ID Zm.1579.1.S1_at
Gene name AMP-binding protein
Homology with ArabidopsisSimilar to At1g77240: AMP-binding protein, putative (HF=3e-7)
Module size 37 genes
NF 0.34
%ile 35.0

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9299.20.93Zm.1579.1.S1_atAY107917.1AMP-binding protein-3e-7At1g77240AMP-binding protein, putativeO.I.H.G.S.X.
0.6077.80.96Zm.6321.1.A1_atAI691388--2e-1At3g17440NPSN13 (NOVEL PLANT SNARE 13)O.I.H.G.S.X.
0.4961.90.97Zm.3808.1.S1_atCF010880low-molecular-weight cysteine-rich protein LCR68-5e+0At4g02850phenazine biosynthesis PhzC/PhzF family proteinO.I.H.G.S.X.
0.4759.90.95Zm.4421.1.A1_atAI987199hypothetical protein LOC100279541-5e+0At1g77640AP2 domain-containing transcription factor, putativeO.I.H.G.S.X.
0.4759.90.94Zm.13593.1.S1_atAY107755.1--1e-8At5g60620phospholipid/glycerol acyltransferase family proteinO.I.H.G.S.X.
0.4658.40.94Zm.6286.1.A1_atAI691256--1e+0At5g11790Ndr family proteinO.I.H.G.S.X.
0.4658.40.95Zm.11178.1.A1_atAI745736--5e-1At5g28490LSH1 (LIGHT-DEPENDENT SHORT HYPOCOTYLS 1)O.I.H.G.S.X.
0.4352.80.95Zm.5990.1.A1_atAY111300.1--2e-6At5g49980AFB5 (Auxin F-Box protein 5)O.I.H.G.S.X.
0.4251.30.95Zm.6175.1.A1_atAI714944hypothetical protein LOC100191780-2e+0At5g64620C/VIF2 (CELL WALL / VACUOLAR INHIBITOR OF FRUCTOSIDASE 2)O.I.H.G.S.X.
0.3945.60.94Zm.3591.2.A1_atAW498095hypothetical protein LOC100280276-5e-2At3g16500PAP1 (PHYTOCHROME-ASSOCIATED PROTEIN 1)O.I.H.G.S.X.
0.3844.20.96Zm.1788.1.A1_atAW447831amino acid transporter-like protein-7e-5At5g38820amino acid transporter family proteinO.I.H.G.S.X.
0.3742.30.95Zm.4300.2.S1_a_atAI881611hypothetical protein LOC100274411-3e-8At5g09880RNA recognition motif (RRM)-containing proteinO.I.H.G.S.X.
0.3742.30.96Zm.5922.1.A1_atCN844887DNA-binding protein S1FA2-2e+0At1g16250kelch repeat-containing F-box family proteinO.I.H.G.S.X.
0.3742.30.95Zm.2781.1.A1_atAY106687.1--5e+0At4g35480RHA3BO.I.H.G.S.X.
0.3742.30.96Zm.810.1.S1_atCF006379--6e-69At5g45550mob1/phocein family proteinO.I.H.G.S.X.
0.3641.30.96Zm.13736.1.A1_atCF007017--1e-8At1g10170ATNFXL1 (ARABIDOPSIS THALIANA NF-X-LIKE 1)O.I.H.G.S.X.
0.3641.30.96Zm.4967.1.A1_atCF043925initiator-binding protein-2e-12At3g46590TRFL1 (TRF-LIKE 1)O.I.H.G.S.X.
0.3641.30.95Zm.16903.1.A1_atBM380219--7e+0At5g10000ATFD4 (ferredoxin 4)O.I.H.G.S.X.
0.3641.30.95Zm.17550.1.A1_atCK368201hypothetical protein LOC100275288-1e+0At1g56450PBG1O.I.H.G.S.X.
0.3437.20.95Zm.17459.1.A1_atAY110122.1Hypothetical protein LOC100191291-1e-20At4g32830AtAUR1 (ATAURORA1)O.I.H.G.S.X.
0.3336.00.97Zm.4164.1.A1_x_atBM079246--5e+0At3g01860unknown proteinO.I.H.G.S.X.
0.3233.40.95Zm.17565.1.A1_atCO525274hypothetical protein LOC100279752-1e+0At1g52855unknown proteinO.I.H.G.S.X.
0.3131.60.95Zm.14065.1.A1_atAY106419.1hypothetical protein LOC100216593-2e-11At5g27640TIF3B1 (TRANSLATION INITIATION FACTOR 3B1)O.I.H.G.S.X.
0.3029.80.95Zm.8656.1.A1_atBM336261hypothetical protein LOC100192906-4e-2At5g27440unknown proteinO.I.H.G.S.X.
0.3029.80.96Zm.1007.1.S1_atAY106317.1stem 28 kDa glycoprotein-2e-6At4g29260acid phosphatase class B family proteinO.I.H.G.S.X.
0.3029.80.96Zm.10219.1.S1_atCK368359Hypothetical LOC542286-2e-10At1g25155anthranilate synthase beta subunit, putativeO.I.H.G.S.X.
0.2928.10.95Zm.1258.1.A1_atBG840128hypothetical protein LOC100193713-9e-1At1g62500protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinO.I.H.G.S.X.
0.2828.10.96Zm.18946.1.A1_atBM338625hypothetical protein LOC100278262-1e+0At1g69660meprin and TRAF homology domain-containing protein / MATH domain-containing proteinO.I.H.G.S.X.
0.2724.60.96Zm.6047.1.A1_atCO530861hypothetical protein LOC100193183-3e-3At1g11650RNA-binding protein 45 (RBP45), putativeO.I.H.G.S.X.
0.2724.60.97Zm.13427.1.S1_atAF124738.1hypothetical protein LOC100194389-1e-7At4g21520transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.2622.70.96Zm.13112.2.S1_a_atAI714527--2e-7At5g63420emb2746 (embryo defective 2746)O.I.H.G.S.X.
0.2622.70.96Zm.16324.1.A1_atCF032268hypothetical protein LOC100194392-5e-17At5g08160ATPK3O.I.H.G.S.X.
0.2419.80.96Zm.13021.1.A1_atCK787287--4e-1At4g15885kinesin motor protein-relatedO.I.H.G.S.X.
0.2216.90.96Zm.17192.1.A1_atBM339467--5e+0At2g22520unknown proteinO.I.H.G.S.X.
0.2014.20.95Zm.12073.1.S1_atCF004248hypothetical protein LOC100276174-4e+0At5g57500transferase, transferring glycosyl groupsO.I.H.G.S.X.
0.1912.80.95Zm.5251.1.A1_atCD982303hypothetical protein LOC100273610-3e-15At4g20980eukaryotic translation initiation factor 3 subunit 7, putative / eIF-3 zeta, putative / eIF3d, putativeO.I.H.G.S.X.
0.147.70.95Zm.5948.1.A1_atCD994991hypothetical protein LOC100191184-1e+1At5g22220-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
5.296.9GSM253277ZM_8d_SG200_3inf_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
4.296.0GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
4.195.9GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.995.7GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.895.5GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.895.5GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.595.1GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.595.1GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.893.5GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
2.893.5GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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