Co-expression analysis

Gene ID	Zm.15742.1.A1_at
Gene name
Homology with Arabidopsis	Similar to Atmg00820: - (HF=8e+0)
Module size	15 genes
NF	0.28
%ile	24.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.93	99.3	0.93	Zm.15742.1.A1_at	CD446346	-	-	8e+0	Atmg00820	-	O.I.	H.G.	S.X.	Please select
0.40	48.5	0.95	Zm.5637.1.A1_at	BM079527	hypothetical protein LOC100217032	-	3e+0	At3g50250	unknown protein	O.I.	H.G.	S.X.	Please select
0.36	41.3	0.96	Zm.6126.1.A1_at	BM382159	esterase PIR7B	-	8e-2	At3g10870	MES17 (METHYL ESTERASE 17)	O.I.	H.G.	S.X.	Please select
0.36	41.3	0.96	Zm.13707.1.A1_at	BQ547937	rhythmically expressed protein	-	2e-14	At2g41250	haloacid dehalogenase-like hydrolase family protein	O.I.	H.G.	S.X.	Please select
0.32	33.4	0.96	Zm.5561.1.A1_at	CF631787	calcineurin B-like protein	-	8e-4	At5g47100	CBL9	O.I.	H.G.	S.X.	Please select
0.31	31.6	0.96	Zm.5056.1.A1_at	CA400979	-	-	6e+0	At5g08400	unknown protein	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.96	Zm.13073.1.S1_at	CA404122	-	-	6e-1	At1g16640	transcriptional factor B3 family protein	O.I.	H.G.	S.X.	Please select
0.29	28.1	0.96	Zm.18516.1.A1_at	CO526437	-	-	2e+0	At5g55570	unknown protein	O.I.	H.G.	S.X.	Please select
0.27	24.6	0.96	Zm.17988.1.A1_at	CO520918	-	-	6e-10	At4g26970	aconitate hydratase/ copper ion binding	O.I.	H.G.	S.X.	Please select
0.23	18.6	0.98	Zm.14807.1.S1_at	BU050489	Hypothetical protein LOC100192365	-	3e+0	At5g15560	unknown protein	O.I.	H.G.	S.X.	Please select
0.21	15.5	0.98	Zm.17572.2.S1_at	CF972387	heat- and acid-stable phosphoprotein	-	3e-8	At5g46020	unknown protein	O.I.	H.G.	S.X.	Please select
0.20	14.2	0.98	Zm.9984.1.A1_at	CO529085	Hypothetical protein LOC100217031	-	4e-4	At1g65000	unknown protein	O.I.	H.G.	S.X.	Please select
0.17	10.6	0.95	Zm.16421.1.A1_at	CN070958	-	-	4e+0	At5g66970	GTP binding	O.I.	H.G.	S.X.	Please select
0.13	6.8	0.96	ZmAffx.779.1.A1_s_at	AI746265	-	-	5e-33	Atcg00780	-	O.I.	H.G.	S.X.	Please select
0.13	6.8	0.95	Zm.14384.1.A1_at	CK144440	hypothetical protein LOC100191907	-	1e-1	At3g25850	DC1 domain-containing protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
8.5	98.1	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.1	98.0	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.6	97.9	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.5	97.8	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.2	97.8	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.4	97.5	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.3	97.4	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
6.3	97.4	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
5.7	97.2	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.7	95.4	GSM202298	B73 immature ear tissue, biological replicate 2	GSE8176	Cis-transcriptional variation in maize inbred lines B73 and Mo17 leads to additive expression - Immature ear data

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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