Co-expression analysis

Gene ID	Zm.1572.1.A1_at
Gene name	hypothetical protein LOC100217100
Homology with Arabidopsis	Similar to At5g08330: TCP family transcription factor, putative (HF=4e+0)
Module size	6 genes
NF	0.46
%ile	55.7

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.73	89.9	0.96	Zm.1572.1.A1_at	BQ538744	hypothetical protein LOC100217100	-	4e+0	At5g08330	TCP family transcription factor, putative	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.96	Zm.14319.1.A1_at	M60526.1	protein cdc2 kinase	-	3e-12	At3g48750	CDC2 (CELL DIVISION CONTROL 2)	O.I.	H.G.	S.X.	Please select
0.46	58.4	0.96	Zm.4300.2.S1_a_at	AI881611	hypothetical protein LOC100274411	-	3e-8	At5g09880	RNA recognition motif (RRM)-containing protein	O.I.	H.G.	S.X.	Please select
0.40	48.5	0.97	Zm.19352.1.S1_at	CO532449	-	-	2e-16	At5g49990	xanthine/uracil permease family protein	O.I.	H.G.	S.X.	Please select
0.25	21.3	0.97	Zm.6321.1.A1_at	AI691388	-	-	2e-1	At3g17440	NPSN13 (NOVEL PLANT SNARE 13)	O.I.	H.G.	S.X.	Please select
0.23	18.6	0.97	Zm.5922.1.A1_at	CN844887	DNA-binding protein S1FA2	-	2e+0	At1g16250	kelch repeat-containing F-box family protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
13.4	98.8	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.7	98.7	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.5	98.7	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.4	98.4	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
9.9	98.3	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.9	98.2	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
8.0	98.0	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.7	97.9	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
7.3	97.8	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
2.6	92.9	GSM320460	protocol: Methylation filtration (MF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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