Co-expression analysis

Gene ID Zm.15683.1.A1_at
Gene name
Homology with ArabidopsisSimilar to At1g27435: unknown protein (HF=2e-2)
Module size 6 genes
NF 0.47
%ile 57.4

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.5674.40.96Zm.15683.1.A1_atCD440363--2e-2At1g27435unknown proteinO.I.H.G.S.X.
0.5369.10.96Zm.16805.6.S1_x_atBG320419ADP-ribosylation factor 1-2e-99At1g10630ATARFA1F (ARABIDOPSIS THALIANA ADP-RIBOSYLATION FACTOR A1F)O.I.H.G.S.X.
0.5369.10.96Zm.6480.2.S1_atAI065715--1e-11At5g64200ATSC35O.I.H.G.S.X.
0.4455.70.96Zm.10380.1.S1_atAY109011.1hypothetical protein LOC100216776-8e-7At3g55960NLI interacting factor (NIF) family proteinO.I.H.G.S.X.
0.3336.00.96Zm.14760.1.A1_atAY104289.1Ubiquitin-conjugating enzyme E2-2e+0At2g13980nucleic acid bindingO.I.H.G.S.X.
0.2724.60.97Zm.6848.1.A1_s_atAI615252elongation factor 1-gamma 2-9e-47At1g57720elongation factor 1B-gamma, putative / eEF-1B gamma, putativeO.I.H.G.S.X.

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Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
22.699.5GSM253282ZM_8d_SG200_3Alu_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
13.998.8GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.498.4GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.098.4GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.098.2GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.698.1GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.997.9GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.997.7GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.797.6GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1621213_at, orthologous to the query gene, Zm.15683.1.A1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8795.21621213_atAt1g27435hypothetical protein LOC100244749-1e+0At5g27280zinc finger (DNL type) family proteinO.I.H.G.S.X.
0.5273.91607160_atAt1g27435hypothetical protein LOC100241076-3e-4At1g60830U2 snRNP auxiliary factor large subunit, putativeO.I.H.G.S.X.
0.4464.11612368_atAt1g27435hypothetical protein LOC100246727-5e-44At2g27350OTU-like cysteine protease family proteinO.I.H.G.S.X.
0.4260.11612355_atAt1g27435--2e-15At3g05090transducin family protein / WD-40 repeat family proteinO.I.H.G.S.X.
0.3650.71614100_s_atAt1g27435hypothetical protein LOC100256218-7e-34At4g21110G10 family proteinO.I.H.G.S.X.
0.3548.51610785_atAt1g27435hypothetical protein LOC100264332-3e-1At3g61389unknown proteinO.I.H.G.S.X.
0.3548.51620537_atAt1g27435hypothetical protein LOC100266362-5e-20At1g24560unknown proteinO.I.H.G.S.X.
0.3141.31614871_s_atAt1g27435hypothetical protein LOC100266189-7e-5At4g32551LUG (LEUNIG)O.I.H.G.S.X.
0.3039.41619680_atAt1g27435hypothetical protein LOC100254201-2e+0At3g14480glycine/proline-rich proteinO.I.H.G.S.X.
0.2937.71607860_atAt1g27435hypothetical protein LOC100242411-3e-1At5g08060unknown proteinO.I.H.G.S.X.
0.2937.71622877_atAt1g27435hypothetical protein LOC100244334-2e+0At1g70400-O.I.H.G.S.X.
0.2937.71619277_atAt1g27435hypothetical protein LOC100267656-8e+0At5g05550transcription factorO.I.H.G.S.X.
0.2632.01608121_atAt1g27435hypothetical protein LOC100264243-4e-1At2g22090UBP1 interacting protein 1a (UBA1a)O.I.H.G.S.X.
0.2632.01619784_atAt1g27435hypothetical protein LOC100248174-2e-9At5g23450ATLCBK1 (A. THALIANA LONG-CHAIN BASE (LCB) KINASE 1)O.I.H.G.S.X.
0.2632.01622462_atAt1g27435hypothetical protein LOC100265163-4e-23At2g14740ATVSR3 (ARABIDOPSIS THALIANA VACULOLAR SORTING RECEPTOR 3)O.I.H.G.S.X.
0.2530.51614453_atAt1g27435hypothetical protein LOC100259029-2e+0At5g18910protein kinase family proteinO.I.H.G.S.X.
0.2327.51619318_atAt1g27435hypothetical protein LOC100248394-5e+0At5g65840-O.I.H.G.S.X.
0.2225.61610845_atAt1g27435hypothetical protein LOC100245365-2e+0At1g68030PHD finger protein-relatedO.I.H.G.S.X.
0.2225.61618130_atAt1g27435hypothetical protein LOC100261654-1e+0At5g23040CDF1 (CELL GROWTH DEFECT FACTOR 1)O.I.H.G.S.X.
0.2124.01613308_atAt1g27435hypothetical protein LOC100247694-8e-14At5g18580FASS (FASS 1)O.I.H.G.S.X.
0.1920.91619540_atAt1g27435hypothetical protein LOC100263170-1e-4At5g54430universal stress protein (USP) family proteinO.I.H.G.S.X.
0.1920.91612660_atAt1g27435hypothetical protein LOC100244096-1e-39At1g20960emb1507 (embryo defective 1507)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum



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