Co-expression analysis

Gene ID	Zm.15666.1.A1_at
Gene name	INDETERMINATE-related protein 10
Homology with Arabidopsis	Similar to At1g61795: - (HF=9e-1)
Module size	7 genes
NF	0.46
%ile	57.1

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.67	85.8	0.98	Zm.15666.1.A1_at	CA403557	INDETERMINATE-related protein 10	-	9e-1	At1g61795	-	O.I.	H.G.	S.X.	Please select
0.53	69.1	0.98	Zm.16824.2.S1_at	BM340171	-	-	1e+0	At3g07170	sterile alpha motif (SAM) domain-containing protein	O.I.	H.G.	S.X.	Please select
0.53	69.1	0.98	Zm.5449.1.A1_at	CF636377	hypothetical protein LOC100273201	-	4e-1	At5g54600	50S ribosomal protein L24, chloroplast (CL24)	O.I.	H.G.	S.X.	Please select
0.47	59.9	0.98	Zm.6597.1.A1_at	AY106822.1	hypothetical protein LOC100279221	-	8e-9	At2g20050	ATP binding / cAMP-dependent protein kinase regulator/ catalytic/ protein kinase/ protein serine/threonine phosphatase	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.98	Zm.10745.1.A1_at	BQ539349	hypothetical protein LOC100272654	-	4e-3	At4g25990	CIL	O.I.	H.G.	S.X.	Please select
0.38	44.2	0.98	Zm.5349.1.A1_at	CF629901	-	-	1e-25	At2g05710	aconitate hydratase, cytoplasmic, putative / citrate hydro-lyase/aconitase, putative	O.I.	H.G.	S.X.	Please select
0.25	21.3	0.98	Zm.7110.1.A1_at	BI233931	-	-	1e+0	At3g49645	unknown protein	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
22.7	99.5	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
20.2	99.3	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
17.0	99.1	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.7	99.0	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.6	99.0	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.9	98.8	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
13.8	98.8	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.8	98.7	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.5	98.7	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
3.7	95.4	GSM205365	Mo17 13 DAP endosperm tissue biological replicate 1	GSE8275	Non-additive and imprinted gene expression in hybrid maize endosperm_13DAP

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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