Co-expression analysis

Gene ID	Zm.15578.1.A1_at
Gene name
Homology with Arabidopsis	Similar to At5g61310: cytochrome c oxidase subunit Vc, putative / COX5C, putative (HF=8e+0)
Module size	9 genes
NF	0.59
%ile	78.8

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF	%ile	CC	Gene ID	Repr. ID	Gene name	Func.	Ev	AGI code	Arabidopsis gene name	O.I.	H.G.	S.X.	Other DB
0.47	59.9	0.92	Zm.15578.1.A1_at	CD448284	-	-	8e+0	At5g61310	cytochrome c oxidase subunit Vc, putative / COX5C, putative	O.I.	H.G.	S.X.	Please select
0.80	94.0	0.94	Zm.13067.1.A1_at	CA404030	hypothetical protein LOC100216884	-	5e-1	At4g17550	transporter-related	O.I.	H.G.	S.X.	Please select
0.71	88.2	0.96	Zm.6160.1.S1_at	CD999853	hypothetical protein LOC100276974	-	3e-1	At1g72020	unknown protein	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.96	ZmAffx.917.1.A1_at	AI782944	-	-	1e+1	At5g26810	pectinesterase family protein	O.I.	H.G.	S.X.	Please select
0.67	85.8	0.96	ZmAffx.928.1.A1_at	AI795442	-	-	8e-1	At5g24270	SOS3 (SALT OVERLY SENSITIVE 3)	O.I.	H.G.	S.X.	Please select
0.58	75.1	0.95	Zm.17669.1.S1_at	CF636811	-	-	3e+0	At1g79790	haloacid dehalogenase-like hydrolase family protein	O.I.	H.G.	S.X.	Please select
0.57	75.1	0.96	ZmAffx.182.1.S1_at	AI668332	-	-	3e+0	At1g68250	unknown protein	O.I.	H.G.	S.X.	Please select
0.42	51.3	0.96	Zm.5886.1.S1_at	AF236371.1	prohibitin4	-	3e-55	At4g28510	ATPHB1 (PROHIBITIN 1)	O.I.	H.G.	S.X.	Please select
0.39	45.6	0.96	Zm.18449.1.A1_at	CO528518	-	-	5e+0	At4g03210	XTH9 (XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 9)	O.I.	H.G.	S.X.	Please select

Click More genes

Specific experiments for the module

Std2 GX	%ile	GSM ID	Assay name	GSE ID	Experiment title	Link to GEO
18.9	99.2	GSM320455	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
18.3	99.2	GSM320453	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
16.1	99.0	GSM320454	protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
15.0	98.9	GSM320449	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.7	98.7	GSM320448	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.7	98.7	GSM320450	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
12.2	98.6	GSM320451	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
11.0	98.5	GSM320447	protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
10.8	98.5	GSM320452	protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes
4.1	95.9	GSM320464	protocol: Methylation filtration (MF) - genotype: CML69 maize inbred - rep3	GSE12770	Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes

Inter-species module comparison

Select a plant to compare co-expressed genes between species.

Arabidopsis_thaliana

Glycine_max

Hordeum_vulgare

Oryza_sativa

Populus_trichocarpa

Triticum_aestivum

Vitis_vinifera

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