Co-expression analysis

Gene ID Zm.15489.1.A1_at
Gene name hypothetical protein LOC100191928 /// hypothetical protein LOC100192092
Homology with ArabidopsisSimilar to At3g18170: transferase, transferring glycosyl groups (HF=2e-5)
Module size 7 genes
NF 0.30
%ile 27.5

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.8696.30.98Zm.15489.1.A1_atCD219260hypothetical protein LOC100191928 /// hypothetical protein LOC100192092-2e-5At3g18170transferase, transferring glycosyl groupsO.I.H.G.S.X.
0.5065.70.98Zm.2548.1.A1_atAY106256.1--2e-26At4g02570ATCUL1 (ARABIDOPSIS THALIANA CULLIN 1)O.I.H.G.S.X.
0.4048.50.98Zm.17189.1.A1_atBM268883--5e+0At5g60540PDX2 (PYRIDOXINE BIOSYNTHESIS 2)O.I.H.G.S.X.
0.3336.00.99Zm.2397.1.A1_atAY104240.1nucleolin-2e+0At1g64710alcohol dehydrogenase, putativeO.I.H.G.S.X.
0.2724.60.98ZmAffx.1070.1.A1_atAI943763--7e-1At5g03090unknown proteinO.I.H.G.S.X.
0.136.80.98Zm.352.1.S1_atAF031482.1calmodulin-5e-90At3g56800CAM3 (CALMODULIN 3)O.I.H.G.S.X.
0.104.60.98ZmAffx.588.1.A1_atAI715016--1e+1At4g33100-O.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
10.298.4GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.098.4GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.998.2GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.698.1GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.598.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.498.1GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.098.0GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.797.9GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
3.394.7GSM253280ZM_8d_SG200_3Alu_IGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO

Inter-species module comparison

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum
Vitis_vinifera



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