Co-expression analysis

Gene ID Zm.15486.2.S1_at
Gene name
Homology with ArabidopsisSimilar to At1g71270: POK (POKY POLLEN TUBE) (HF=7e-20)
Module size 6 genes
NF 0.68
%ile 89.6

Co-expressed genes

Click gene/probe ID to show a list of genes that are co-expressed with the gene.

VF %ile CC Gene ID Repr. ID Gene name Func.EvAGI codeArabidopsis gene name O.I. H.G. S.X. Other DB
0.9199.00.99Zm.15486.2.S1_atAY108982.1--7e-20At1g71270POK (POKY POLLEN TUBE)O.I.H.G.S.X.
0.7389.90.99Zm.12201.1.A1_atBM379502plastid ADP-glucose pyrophosphorylase large subunit-3e-13At5g19220APL1 (ADP GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 1)O.I.H.G.S.X.
0.6785.80.98Zm.725.1.A1_atAY107740.1hypothetical protein LOC100193467-7e-14At3g27740CARA (CARBAMOYL PHOSPHATE SYNTHETASE A)O.I.H.G.S.X.
0.6077.80.99Zm.14288.1.A1_atBM348960--1e-37At1g60780HAP13 (HAPLESS 13)O.I.H.G.S.X.
0.5775.10.99RPTR-Zm-M57289-1_s_atRPTR-Zm-M57289-1---O.I.H.G.S.X.
0.4251.30.99Zm.6217.1.A1_atBE129797plant-specific domain TIGR01589 family protein-7e-1At1g28600lipase, putativeO.I.H.G.S.X.

Click More genes



Specific experiments for the module

Std2 GX %ile GSM ID Assay name GSE ID Experiment title Link to GEO
12.498.7GSM320453protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
10.898.5GSM320455protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
9.598.3GSM320450protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.998.2GSM320452protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.698.1GSM320451protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
8.098.0GSM320449protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.597.8GSM320454protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
7.397.8GSM320448protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO
6.897.6GSM253276ZM_8d_Mock_3inf_IIIGSE10023Maize gene expression during infection with Ustilago maydisLink to GEO
5.997.3GSM320447protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1GSE12770Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant GenomesLink to GEO

Inter-species module comparison

A co-expression module including the grape gene, 1621947_at, orthologous to the query gene, Zm.15486.2.S1_at

VF%ileGene IDRepr. IDGene NameFunc.EvAGI codeArabidopsis gene nameO.I.H.G.S.X.Other DB
0.8293.91621947_atAt1g71270similar to non-symbiotic hemoglobin class 1-7e-14At2g16060AHB1 (ARABIDOPSIS HEMOGLOBIN 1)O.I.H.G.S.X.
0.5980.61607804_atAt1g71270--2e-45At1g16270protein kinase family proteinO.I.H.G.S.X.
0.5375.21609762_s_atAt1g71270hypothetical protein LOC100257013-4e-19At1g16270protein kinase family proteinO.I.H.G.S.X.
0.4868.81617494_atAt1g71270--4e-13At3g13340WD-40 repeat family proteinO.I.H.G.S.X.
0.4767.71616327_atAt1g71270hypothetical protein LOC100250497-1e+0At1g15330CBS domain-containing proteinO.I.H.G.S.X.
0.4767.71611428_atAt1g71270hypothetical protein LOC100242068-1e+0At5g48470unknown proteinO.I.H.G.S.X.
0.4666.51612892_atAt1g71270hypothetical protein LOC100247446-4e-29At2g01770VIT1 (vacuolar iron transporter 1)O.I.H.G.S.X.
0.4464.11621277_atAt1g71270hypothetical protein LOC100252641-2e-24At1g72820mitochondrial substrate carrier family proteinO.I.H.G.S.X.
0.4260.11611013_atAt1g71270hypothetical protein LOC100243798-4e-1At5g22890zinc finger (C2H2 type) family proteinO.I.H.G.S.X.
0.4260.11610138_atAt1g71270hypothetical protein LOC100267148-3e-13At4g27460CBS domain-containing proteinO.I.H.G.S.X.
0.4260.11609766_atAt1g71270hypothetical protein LOC100255070-4e+0At5g22850aspartyl protease family proteinO.I.H.G.S.X.
0.4260.11622047_atAt1g71270hypothetical protein LOC100256407-3e-8At1g75960AMP-binding protein, putativeO.I.H.G.S.X.
0.4158.71615778_atAt1g71270hypothetical protein LOC100253193-1e-3At2g42670unknown proteinO.I.H.G.S.X.
0.3954.91609629_atAt1g71270hypothetical protein LOC100250476-3e-17At5g13330Rap2.6L (related to AP2 6L)O.I.H.G.S.X.
0.3954.91614430_atAt1g71270hypothetical protein LOC100255931-1e-3At5g57060unknown proteinO.I.H.G.S.X.
0.3751.71618981_atAt1g71270hypothetical protein LOC100261093-2e-35At5g14780FDH (FORMATE DEHYDROGENASE)O.I.H.G.S.X.
0.3751.71615660_atAt1g71270similar to UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin-protein ligase-1e-51At4g27960UBC9 (UBIQUITIN CONJUGATING ENZYME 9)O.I.H.G.S.X.
0.3751.71620931_atAt1g71270hypothetical LOC100243703-2e-2At3g55940phosphoinositide-specific phospholipase C, putativeO.I.H.G.S.X.
0.3751.71615208_atAt1g71270hypothetical protein LOC100255070-3e-19At5g22850aspartyl protease family proteinO.I.H.G.S.X.
0.3243.11611282_atAt1g71270hypothetical protein LOC100253193-1e+0At3g58670unknown proteinO.I.H.G.S.X.
0.3039.41619873_atAt1g71270hypothetical protein LOC100264420-2e-9At5g42250alcohol dehydrogenase, putativeO.I.H.G.S.X.
0.2837.71607078_atAt1g71270hypothetical protein LOC100267148-2e-2At3g14670unknown proteinO.I.H.G.S.X.
0.2734.01618259_atAt1g71270hypothetical LOC100245758-3e-32At5g65780ATBCAT-5O.I.H.G.S.X.
0.2530.51610591_atAt1g71270hypothetical protein LOC100251627-1e-5At2g46370JAR1 (JASMONATE RESISTANT 1)O.I.H.G.S.X.
0.2428.71613947_atAt1g71270hypothetical protein LOC100253773-8e-3At3g03520phosphoesterase family proteinO.I.H.G.S.X.
0.2225.61622321_atAt1g71270hypothetical protein LOC100257583-8e-12At2g07640D2,D4-dienoyl-CoA reductase-relatedO.I.H.G.S.X.
0.2022.41612440_atAt1g71270--9e-8At4g11410short-chain dehydrogenase/reductase (SDR) family proteinO.I.H.G.S.X.
0.1920.91615486_atAt1g71270hypothetical protein LOC100245706-7e-3At5g15410DND1 (DEFENSE NO DEATH 1)O.I.H.G.S.X.

Select a plant to compare co-expressed genes between species.
Arabidopsis_thaliana
Glycine_max
Hordeum_vulgare
Oryza_sativa
Populus_trichocarpa
Triticum_aestivum



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