| Gene ID | Zm.15486.2.S1_at |
| Gene name | |
| Homology with Arabidopsis | Similar to At1g71270: POK (POKY POLLEN TUBE) (HF=7e-20) |
| Module size | 6 genes |
| NF | 0.68 |
| %ile | 89.6 |
| VF | %ile | CC | Gene ID | Repr. ID | Gene name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.91 | 99.0 | 0.99 | Zm.15486.2.S1_at | AY108982.1 | - | - | 7e-20 | At1g71270 | POK (POKY POLLEN TUBE) | O.I. | H.G. | S.X. | |
| 0.73 | 89.9 | 0.99 | Zm.12201.1.A1_at | BM379502 | plastid ADP-glucose pyrophosphorylase large subunit | - | 3e-13 | At5g19220 | APL1 (ADP GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 1) | O.I. | H.G. | S.X. | |
| 0.67 | 85.8 | 0.98 | Zm.725.1.A1_at | AY107740.1 | hypothetical protein LOC100193467 | - | 7e-14 | At3g27740 | CARA (CARBAMOYL PHOSPHATE SYNTHETASE A) | O.I. | H.G. | S.X. | |
| 0.60 | 77.8 | 0.99 | Zm.14288.1.A1_at | BM348960 | - | - | 1e-37 | At1g60780 | HAP13 (HAPLESS 13) | O.I. | H.G. | S.X. | |
| 0.57 | 75.1 | 0.99 | RPTR-Zm-M57289-1_s_at | RPTR-Zm-M57289-1 | - | - | - | O.I. | H.G. | S.X. | |||
| 0.42 | 51.3 | 0.99 | Zm.6217.1.A1_at | BE129797 | plant-specific domain TIGR01589 family protein | - | 7e-1 | At1g28600 | lipase, putative | O.I. | H.G. | S.X. |
| Std2 GX | %ile | GSM ID | Assay name | GSE ID | Experiment title | Link to GEO |
|---|---|---|---|---|---|---|
| 12.4 | 98.7 | GSM320453 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 10.8 | 98.5 | GSM320455 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 9.5 | 98.3 | GSM320450 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.9 | 98.2 | GSM320452 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.6 | 98.1 | GSM320451 | protocol: Cot filtration (CF) - genotype: Mo17 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 8.0 | 98.0 | GSM320449 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep3 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.5 | 97.8 | GSM320454 | protocol: Cot filtration (CF) - genotype: CML69 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 7.3 | 97.8 | GSM320448 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep2 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| 6.8 | 97.6 | GSM253276 | ZM_8d_Mock_3inf_III | GSE10023 | Maize gene expression during infection with Ustilago maydis | |
| 5.9 | 97.3 | GSM320447 | protocol: Cot filtration (CF) - genotype: B73 maize inbred - rep1 | GSE12770 | Evaluation of Target Preparation Methods for Single-Feature Polymorphism Detection in Large Complex Plant Genomes | |
| VF | %ile | Gene ID | Repr. ID | Gene Name | Func. | Ev | AGI code | Arabidopsis gene name | O.I. | H.G. | S.X. | Other DB |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 0.53 | 71.3 | Os03g0417900 | At1g71270 | - | Vps52/Sac2 family protein | 2e-24 | At1g71270 | POK (POKY POLLEN TUBE) | O.I. | H.G. | S.X. | |
| 0.67 | 87.2 | Os09g0408000 | At1g71270 | - | Conserved hypothetical protein | 2e-11 | At3g50590 | nucleotide binding | O.I. | H.G. | S.X. | |
| 0.40 | 51.1 | Os07g0564700 | At1g71270 | - | Hypothetical protein | 5e-18 | At3g43300 | ATMIN7 (ARABIDOPSIS THALIANA HOPM INTERACTOR 7) | O.I. | H.G. | S.X. | |
| 0.38 | 46.9 | Os03g0711400 | At1g71270 | - | Coatomer alpha subunit | 4e-79 | At1g62020 | coatomer protein complex, subunit alpha, putative | O.I. | H.G. | S.X. | |
| 0.36 | 44.0 | Os01g0653800 | At1g71270 | - | WD40-like domain containing protein | 1e-32 | At5g24710 | - | O.I. | H.G. | S.X. | |
| 0.17 | 12.6 | Os05g0592400 | At1g71270 | - | UV-damaged DNA binding protein | 3e-45 | At4g05420 | DDB1A (DAMAGED DNA BINDING PROTEIN 1A) | O.I. | H.G. | S.X. |
| Arabidopsis_thaliana |
| Glycine_max |
| Hordeum_vulgare |
| Populus_trichocarpa |
| Triticum_aestivum |
| Vitis_vinifera |
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